Tudor I. Oprea

Hydrologic Research Center — United States

Computer Science · Physical Sciences

84h-index28.4kcitations509works3.02yr avg
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Research Topics

Computational Drug Discovery Methods(180), Bioinformatics and Genomic Networks(44), Pharmacogenetics and Drug Metabolism(32), Estrogen and related hormone effects(31), Analytical Chemistry and Chromatography(29)

Publications509 total

CACHE Challenge #3: Targeting the Nsp3 Macrodomain of SARS-CoV-2
Journal of Chemical Information and Modeling·2026Open Access
Medicines, Diseases, Indications, and Contraindications (MeDIC): a foundational resource to support drug repurposing
Nucleic Acids Research·2025Open Access
Proteomic analysis defines kinase taxonomies specific for subtypes of breast cancer
UNC Libraries·2025Open Access
Mondo: integrating disease terminology across communities
Genetics·2025· 5 citedOpen Access
CACHE Challenge #3: Targeting the Nsp3 Macrodomain of SARS-CoV-2
2025Open Access
Novel drug targets in 2024
Nature Reviews Drug Discovery·2025· 2 cited
SmartGraph API: Programmatic Knowledge Mining in Network-Pharmacology Setting
Journal of Chemical Information and Modeling·2024Open Access
CORUM in 2024: protein complexes as drug targets
Nucleic Acids Research·2024· 8 citedOpen Access
Rethinking Medicinal Chemistry in the Cheminformatics Age
Journal of Medicinal Chemistry·2024· 2 cited
Using Artificial Intelligence to select drug targets in oncology
Journal of Medical and Radiation Oncology·2024Open Access
A critical overview of computational approaches employed for COVID-19 drug discovery
UNC Libraries·2024· 5 citedOpen Access
QSAR without borders
UNC Libraries·2024· 1 citedOpen Access
TIN-X version 3: update with expanded dataset and modernized architecture for enhanced illumination of understudied targets
PeerJ·2024· 4 citedOpen Access
Using Artificial Intelligence to Uncover Novel Therapeutic Targets in Hematology/Oncology
Journal of Pharmacology and Experimental Therapeutics·2024
Novel drug targets in 2023
Nature Reviews Drug Discovery·2024· 11 cited
Abstract 3535: Seeking novel therapeutic targets in oncology using machine learning
Cancer Research·2024· 1 cited
SmartGraph API: ProgrammaticKnowledge Mining in Network-Pharmacology Setting
2024Open Access
Overview of the Knowledge Management Center for Illuminating the Druggable Genome
Drug Discovery Today·2024· 11 citedOpen Access
Node-degree aware edge sampling mitigates inflated classification performance in biomedical random walk-based graph representation learning
Bioinformatics Advances·2024· 7 citedOpen Access
Correction: Exploring DrugCentral: from molecular structures to clinical effects
Journal of Computer-Aided Molecular Design·2023Open Access
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Frequent Co-authors

Cristian Bologa(14), Larry A. Sklar(13), Oleg Ursu(10), Eric R. Prossnitz(8), Jayme Holmes(6), Anna Waller(6), Jeremy J. Yang(6), Jeffrey B. Arterburn(5), Lars Juhl Jensen(5), Stephen L. Mathias(5), Ðắc-Trung Nguyễn(5), Anton Simeonov(5), Anna Gaulton(4), Anne Hersey(4), John P. Overington(4), Bruce S. Edwards(4), Søren Brunak(4), Ajit Jadhav(4), Stephan C. Schürer(4), Noel Southall(4)