Juan Pablo Niño‐García

Universidad de Antioquia — Colombia

Environmental Science · Physical Sciences

11h-index1.0kcitations25works1.02yr avg
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Research Topics

Microbial Community Ecology and Physiology(18), Genomics and Phylogenetic Studies(8), Gut microbiota and health(6), Marine and coastal ecosystems(5), Environmental DNA in Biodiversity Studies(5)

Publications25 total

Terrestrial landscape as the main driver of bacterioplankton communities along a hydrological network located in the Colombian Amazon
Scientific Reports·2025Open Access
Mercury biomagnification and microbial adaptation in a mining-impacted Amazonian River
Journal of Hazardous Materials·2025Open Access
A georeferenced rRNA amplicon database of aquatic microbiomes from South America
Zenodo (CERN European Organization for Nuclear Research)·2025Open Access
Microbial diversity and abundance of Hg related genes from water, sediment and soil the Colombian amazon ecosystems impacted by artisanal and small-scale gold mining
Chemosphere·2024· 4 citedOpen Access
Building a genome-based understanding of bacterial pH preferences
Science Advances·2023· 69 citedOpen Access
Building a genome-based understanding of bacterial pH preferences
2023· 7 citedOpen Access
Effects of Mercury Contamination on Microbial Diversity in Colombian Amazon Ecosystems Disturbed by Artisanal and Small-Scale Gold Mining
SSRN Electronic Journal·2023Open Access
A georeferenced rRNA amplicon database of aquatic microbiomes from South America
Scientific Data·2022· 10 citedOpen Access
A georeferenced rRNA amplicon database of aquatic microbiomes from South America
2022· 1 citedOpen Access
Taxonomic differences shape the responses of freshwater aerobic anoxygenic phototrophic bacterial communities to light and predation
Molecular Ecology·2020· 28 citedOpen Access
Deterministic and stochastic processes driving the shift in the prokaryotic community composition in wastewater treatment plants of a coastal Chinese city
Applied Microbiology and Biotechnology·2019· 19 cited
CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes
BMC Genomics·2018· 5 citedOpen Access
Factors shaping the gut bacterial community assembly in two main Colombian malaria vectors
Microbiome·2018· 119 citedOpen Access
Dispersal across the landscape shapes the rare biosphere of freshwater bacterioplankton communities
DIGITAL.CSIC (Spanish National Research Council (CSIC))·2018
Additional file 8: of Factors shaping the gut bacterial community assembly in two main Colombian malaria vectors
Figshare·2018Open Access
Additional file 9: of Factors shaping the gut bacterial community assembly in two main Colombian malaria vectors
Figshare·2018Open Access
Contrasting dynamics and environmental controls of dispersed bacteria along a hydrologic gradient
Advances in Oceanography and Limnology·2017· 16 citedOpen Access
Identifying the core seed bank of a complex boreal bacterial metacommunity
The ISME Journal·2017· 24 citedOpen Access
Spatial and temporal dynamics of virioplankton in a high mountain tropical reservoir, El Neusa (Cundinamarca, Colombia)
Latin American Journal of Aquatic Research·2017· 1 citedOpen Access
Exploring the Ecological Coherence between the Spatial and Temporal Patterns of Bacterioplankton in Boreal Lakes
Frontiers in Microbiology·2017· 12 citedOpen Access
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Frequent Co-authors

Clara Ruiz‐González(9), Paul A. del Giorgio(9), Hugo Sarmento(4), Gladys Inés Cardona(4), Priscila Bascuñán(3), Yadira Galeano-Castañeda(3), David Serre(3), Margarita M. Correa(3), Sebastián Metz(3), Paula Huber(3), Erick Mateus‐Barros(3), Pedro C. Junger(3), Michaela L. de Melo(3), Inessa Lacativa Bagatini(3), Irina Izaguirre(3), Mariana Câmara dos Reis(3), María Eugenia Llames(3), Victoria Accattatis(3), María Victoria Quiroga(3), Melina Devercelli(3)