Allan Peter Davis

North Carolina State University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

35h-index52.3kcitations69works44.52yr avg
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Research Topics

Bioinformatics and Genomic Networks(31), Biomedical Text Mining and Ontologies(26), Computational Drug Discovery Methods(20), Gene expression and cancer classification(13), Health, Environment, Cognitive Aging(10)

Publications69 total

Linking chemical data from the Comparative Toxicogenomics Database with adverse outcome pathways from the AOP-Wiki: a mechanistic data-oriented approach to help inform environmental health
F1000Research·2025Open Access
Integrating AI-powered text mining from PubTator into the manual curation workflow at the Comparative Toxicogenomics Database
Database·2025· 21 citedOpen Access
Comparative Toxicogenomics Database’s 20th anniversary: update 2025
Nucleic Acids Research·2024· 144 citedOpen Access
Transforming environmental health datasets from the comparative toxicogenomics database into chord diagrams to visualize molecular mechanisms
Frontiers in Toxicology·2024· 13 citedOpen Access
Comparative Toxicogenomics Database: A tool to investigate the effects of environmental exposures on the etiology of Alzheimer’s disease
Alzheimer s & Dementia·2023Open Access
CTD tetramers: a new online tool that computationally links curated chemicals, genes, phenotypes, and diseases to inform molecular mechanisms for environmental health
Toxicological Sciences·2023· 79 citedOpen Access
Comparative Toxicogenomics Database (CTD): update 2023
Nucleic Acids Research·2022· 812 citedOpen Access
CTD anatomy: Analyzing chemical-induced phenotypes and exposures from an anatomical perspective, with implications for environmental health studies
Current Research in Toxicology·2021· 33 citedOpen Access
Predicting molecular mechanisms, pathways, and health outcomes induced by Juul e-cigarette aerosol chemicals using the Comparative Toxicogenomics Database
Current Research in Toxicology·2021· 74 citedOpen Access
Regulatory status of pesticide residues in cannabis: Implications to medical use in neurological diseases
Current Research in Toxicology·2021· 20 citedOpen Access
Comparative Toxicogenomics Database (CTD): update 2021
Nucleic Acids Research·2020· 1.1k citedOpen Access
Leveraging the Comparative Toxicogenomics Database to Fill in Knowledge Gaps for Environmental Health: A Test Case for Air Pollution-induced Cardiovascular Disease
Toxicological Sciences·2020· 38 citedOpen Access
Public data sources to support systems toxicology applications
Current Opinion in Toxicology·2019· 13 citedOpen Access
Using the Comparative Toxicogenomics Database to Further Our Understanding of Environmental Exposures on Human Health
ISEE Conference Abstracts·2018· 2 cited
The Comparative Toxicogenomics Database: update 2019
Nucleic Acids Research·2018· 1.0k citedOpen Access
Chemical-Induced Phenotypes at CTD Help Inform the Predisease State and Construct Adverse Outcome Pathways
Toxicological Sciences·2018· 58 citedOpen Access
Accessing an Expanded Exposure Science Module at the Comparative Toxicogenomics Database
Environmental Health Perspectives·2018· 60 citedOpen Access
Chemical-phenotype curation at CTD
Faculty of 1000 Research Ltd·2017Open Access
Exposure science in the comparative toxicogenomics database: Linking chemical stressors to outcomes via an exposure ontology
Faculty of 1000 Research Ltd·2017Open Access
The Comparative Toxicogenomics Database: update 2017
Nucleic Acids Research·2016· 553 citedOpen Access
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Frequent Co-authors

Carolyn Mattingly(38), Thomas C. Wiegers(35), Daniela Sciaky(19), Jolene Wiegers(16), Robin J. Johnson(14), Cynthia Grondin(11), Michael C. Rosenstein(10), Benjamin L. King(8), Cynthia Saraceni-Richards(6), Cynthia G. Murphy(5), Kelley Lennon-Hopkins(5), Roy McMorran(4), Fern Barkalow(4), Melissa Strong(4), Brent Wyatt(4), Judith A. Blake(3), Janan T. Eppig(3), Mario R. Capecchi(3), Jean M. Lay(3), Christian Murphy(3)