Katerina Kraft

Amgen (United States) — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

17h-index5.0kcitations45works14.62yr avg
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Research Topics

Genomics and Chromatin Dynamics(14), Cancer Genomics and Diagnostics(9), RNA Research and Splicing(7), Chromosomal and Genetic Variations(6), CRISPR and Genetic Engineering(6)

Publications45 total

scAmp analyzes focal gene amplifications at single-cell resolution
2026Open Access
Fibroblasts of disparate developmental origins harbor anatomically variant scarring potential
Cell·2026
Abstract A007: EcDNA-derived structural variants: A common pathway to oncogenic fusion transcript amplification in cancer
Cancer Research·2026
EcDNA-borne structural variants drive oncogenic fusion transcript amplification
Cell·2026· 1 citedOpen Access
Reconstructing the three-dimensional architecture of extrachromosomal DNA with ec3D
Figshare·2026Open Access
Reconstructing the three-dimensional architecture of extrachromosomal DNA with ec3D
Figshare·2026Open Access
Reconstructing the three-dimensional architecture of extrachromosomal DNA with ec3D
Nature Communications·2025Open Access
Genetic elements promote retention of extrachromosomal DNA in cancer cells
Nature·2025· 5 citedOpen Access
Genetic and chromatin regulation of Pvt1 monoallelic expression
Cell Reports·2025Open Access
Enhancer activation from transposable elements in extrachromosomal DNA
Nature Cell Biology·2025· 8 citedOpen Access
Genetic elements promote retention of extrachromosomal DNA in cancer cells
2025Open Access
EcDNA-borne PVT1 fusion stabilizes oncogenic mRNAs
2025· 2 citedOpen Access
MorPhiC Consortium: towards functional characterization of all human genes
Nature·2025· 12 citedOpen Access
Reconstructing the three-dimensional architecture of extrachromosomal DNA with ec3D
2025· 4 citedOpen Access
Enhancer activation from transposable elements in extrachromosomal DNA
2024· 2 citedOpen Access
Bidirectional epigenetic editing reveals hierarchies in gene regulation
Nature Biotechnology·2024· 33 citedOpen Access
Xist ribonucleoproteins promote female sex-biased autoimmunity
Cell·2024· 182 citedOpen Access
3D genome mapping identifies subgroup-specific chromosome conformations and tumor-dependency genes in ependymoma
Nature Communications·2023· 21 citedOpen Access
Sanger sequencing data to verify mouse Rex1 locus deletion
Figshare·2023Open Access
Sanger sequencing data to verify mouse Dppa locus deletion
Figshare·2023Open Access
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Frequent Co-authors

Stefan Mundlos(21), Howard Y. Chang(19), Paul S. Mischel(11), King L. Hung(10), Quanming Shi(10), Julia A. Belk(9), Abhijit Chakraborty(9), Ferhat Ay(9), Lars Wittler(7), Jens Luebeck(7), Vineet Bafna(7), Anton G. Henssen(7), Lukas Chávez(7), Ivy Tsz-Lo Wong(6), Owen Chapman(6), Verena Heinrich(5), Guillaume Andrey(5), Robert Schöpflin(5), Jiao Sima(5), Vishnu Dileep(5)