Martin A. Smith

Centre Hospitalier Universitaire Sainte-Justine — Canada

Biochemistry, Genetics and Molecular Biology · Life Sciences

49h-index10.7kcitations180works3.72yr avg
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Research Topics

Genomics and Phylogenetic Studies(22), Neuroscience and Neuropharmacology Research(19), Cancer-related molecular mechanisms research(18), RNA modifications and cancer(18), Ion channel regulation and function(16)

Publications179 total

Single-workflow Nanopore whole genome sequencing with adaptive sampling for accelerated and comprehensive pediatric cancer profiling
2025Open Access
ECSFinder: optimized prediction of evolutionarily conserved RNA secondary structures from genome sequences
Nucleic Acids Research·2025Open Access
Novel insights into the Leishmania infantum transcriptome diversity of protein-coding and non-coding sequences in both stages of parasite development using nanopore direct RNA sequencing
BMC Genomics·2025· 3 citedOpen Access
Comparative genome analysis investigation of nosocomial and community-acquired cases of Legionnaires’ disease caused by ST2858 and ST378
Microbiology Spectrum·2025· 1 citedOpen Access
HIVepsilon-seq—scalable characterization of intact persistent proviral HIV reservoirs in women
UNC Libraries·2025Open Access
Novel insights into the Leishmania infantum transcriptome diversity of protein-coding and non-coding sequences in both stages of parasite development using Nanopore direct RNA sequencing
2025Open Access
Evolving Perspectives on Immune Repertoire Profiling: Challenges and Opportunities in the Era of Long-Read Sequencing
Clinical Chemistry·2024Open Access
Machine learning-enhanced immunopeptidomics applied to T-cell epitope discovery for COVID-19 vaccines
Nature Communications·2024· 9 citedOpen Access
Evolutionary divergent clusters of transcribed extinct truncated retroposons drive low mRNA expression and developmental regulation in the protozoan Leishmania
BMC Biology·2024· 2 citedOpen Access
<i>ECSfinder</i> : Optimized prediction of evolutionarily conserved RNA secondary structures from genome sequences
2024Open Access
Novel applications of Convolutional Neural Networks in the age of Transformers
Scientific Reports·2024· 33 citedOpen Access
RNA-Based Classification of Homologous Recombination Deficiency in Racially Diverse Patients with Breast Cancer
UNC Libraries·2024Open Access
Assembly Arena: Benchmarking RNA isoform reconstruction algorithms for nanopore sequencing
2024· 4 citedOpen Access
Integrating Machine Learning-Enhanced Immunopeptidomics and SARS-CoV-2 Population-Scale Analyses Unveils Novel Antigenic Features for Next-Generation COVID-19 Vaccines
2024· 2 citedOpen Access
Novel applications of Convolutional Neural Networks in the age of Transformers
Research Square (Research Square)·2024· 1 citedOpen Access
HIVepsilon-seq—scalable characterization of intact persistent proviral HIV reservoirs in women
Journal of Virology·2023· 1 citedOpen Access
CBFA2T3::GLIS2 pediatric acute megakaryoblastic leukemia is sensitive to BCL-XL inhibition by navitoclax and DT2216
Blood Advances·2023· 25 citedOpen Access
Supplementary Video 1 from The Melanoma‐Upregulated Long Noncoding RNA &lt;i&gt;SPRY4-IT1&lt;/i&gt; Modulates Apoptosis and Invasion
2023Open Access
Supplementary Methods from The Melanoma‐Upregulated Long Noncoding RNA &lt;i&gt;SPRY4-IT1&lt;/i&gt; Modulates Apoptosis and Invasion
2023Open Access
Recognising side effects of antipsychotics in children with intellectual disabilities
BMJ Case Reports·2023· 20 citedOpen Access
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Frequent Co-authors

John S. Mattick(9), Lutz G.W. Hilgenberg(9), Diane K. O’Dowd(7), Manju A. Kurian(6), Kirston Barton(6), Jean‐Pierre Lin(5), Marcel E. Dinger(4), James M. Ferguson(4), Tim R. Mercer(3), Joanna Crawford(3), Eva Maria Novoa(3), Shaun Carswell(3), Tammy Hedderly(3), Hardev Pall(3), Kathryn J. Peall(3), Barbara Papadopoulou(3), Philip Jardine(3), Mary D. King(3), Ira W. Deveson(3), Reng-Rong Da(3)