Jonas Pfab

University of Washington Bothell — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

5h-index474citations14works0.02yr avg
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Research Topics

Advanced Electron Microscopy Techniques and Applications(11), Enzyme Structure and Function(9), RNA and protein synthesis mechanisms(5), Topic Modeling(2), Protein Structure and Dynamics(2)

Publications14 total

DeepTracer Web Service for Fast and Accurate De Novo Protein Complex Structure Prediction from Cryo-EM
Computational biology·2022· 1 cited
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge
Nature Methods·2021· 117 citedOpen Access
迅速de novo凍結-EM蛋白質構造モデル化のためのDeepTracerとCoV関連複合体に関する特殊研究【JST・京大機械翻訳】
2021
DeepTracer for fast de novo cryo-EM protein structure modeling and special studies on CoV-related complexes
Proceedings of the National Academy of Sciences·2020· 213 citedOpen Access
2019 EMDataResource Model Metrics Challenge Dataset
Zenodo (CERN European Organization for Nuclear Research)·2020Open Access
2019 EMDataResource Model Metrics Challenge Dataset
Zenodo (CERN European Organization for Nuclear Research)·2020· 1 citedOpen Access
DeepTracer: Fast Cryo-EM Protein Structure Modeling and Special Studies on CoV-related Complexes
2020· 3 citedOpen Access
Outcomes of the 2019 EMDataResource model challenge: validation of cryo-EM models at near-atomic resolution
2020· 7 citedOpen Access
Deep Learning to Predict Protein Backbone Structure from High-Resolution Cryo-EM Density Maps
Scientific Reports·2020· 107 citedOpen Access
DeepTracer: Predicting Backbone Atomic Structure from High Resolution Cryo-EM Density Maps of Protein Complexes
2020· 5 citedOpen Access
Deciphering Protein Complex Structures from Cryo-electron Microscopy Maps using Deep Learning
ResearchWorks at the University of Washington (University of Washington)·2020Open Access
Automated Threshold Selection for Cryo-EM Density Maps
2019· 2 cited
Automated Threshold Selection for Cryo-EM Density Maps
2019· 2 citedOpen Access
Cascaded-CNN: Deep Learning to Predict Protein Backbone Structure from High-Resolution Cryo-EM Density Maps
2019· 15 citedOpen Access

Frequent Co-authors

Dong Si(12), Renzhi Cao(6), Jianlin Cheng(6), Jie Hou(6), Tianqi Wu(6), Liguo Wang(5), Catherine L. Lawson(4), Andriy Kryshtafovych(4), Paul D. Adams(4), Pavel V. Afonine(4), Matthew L. Baker(4), Benjamin A. Barad(4), Paul S. Bond(4), Tom Burnley(4), Grzegorz Chojnowski(4), Kevin Cowtan(4), Ken A. Dill(4), Frank DiMaio(4), Daniel P. Farrell(4), James S. Fraser(4)