Morgan Shine

Yale University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

6h-index572citations24works24.02yr avg
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Research Topics

RNA and protein synthesis mechanisms(12), SARS-CoV-2 and COVID-19 Research(6), RNA Research and Splicing(5), Bacteriophages and microbial interactions(4), RNA modifications and cancer(4)

Publications24 total

Transcriptional readthrough precedes alternative splicing programs triggered in CML cells by imatinib
2025· 1 citedOpen Access
Co-transcriptional gene regulation in eukaryotes and prokaryotes
Nature Reviews Molecular Cell Biology·2024· 71 citedOpen Access
Abstract P09: Splicing and translation in chronic myeloid leukemia cells adapting to bone marrow microenvironment and chemotherapy
Blood Cancer Discovery·2024
Effect of the SARS-CoV-2 Delta-associated G15U mutation on the s2m element dimerization and its interactions with miR-1307-3p
RNA·2023· 7 citedOpen Access
Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3’hExo
RNA Biology·2023Open Access
Delta SARS-CoV-2 s2m Structure, Dynamics, and Entropy: Consequences of the G15U Mutation
ACS Physical Chemistry Au·2023· 5 citedOpen Access
Effect of the SARS-CoV-2 Delta-associated G15U mutation on the s2m element dimerization and its interactions with miR-1307-3p
2023· 1 citedOpen Access
Five questions on how biochemistry can combat climate change
BBA Advances·2023· 5 citedOpen Access
Uridylation of the histone mRNA stem-loop weakens binding interactions with SLBP while maintaining interactions with 3’hExo
Figshare·2023Open Access
Inside Front Cover Image, Volume 95, Number 1, January 2023
Journal of Medical Virology·2023Open Access
Bioinformatics analysis of the s2m mutations within the SARS‐CoV‐2 Omicron lineages
Journal of Medical Virology·2022· 14 citedOpen Access
US-align: universal structure alignments of proteins, nucleic acids, and macromolecular complexes
Nature Methods·2022· 430 citedOpen Access
Computational and Biophysical Analysis of RNA/Protein Complexes in Histone mRNA Degradation
The FASEB Journal·2022
US-align: Universal Structure Alignments of Proteins, Nucleic Acids, and Macromolecular Complexes
2022· 32 citedOpen Access
AMIGOS III: pseudo-torsion angle visualization and motif-based structure comparison of nucleic acids
Bioinformatics·2022· 6 citedOpen Access
Stem-loop II motif (s2m) structural and dynamical differences between SARS-CoV-2 and b.1.617.2 (Delta) variant
Biophysical Journal·2022Open Access
Characterization of the S2M G15U mutation associated with the SARS-CoV-2 delta variant
Biophysical Journal·2022Open Access
AMIGOS III Data
Figshare·2022Open Access
AMIGOS III data (usage examples and benchmark analysis)
Figshare·2022Open Access
Molecular Dynamic Simulations of Folding and Dimerization in Mutations Found in the s2m Motif of SARS‐Cov‐2
The FASEB Journal·2021Open Access
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Frequent Co-authors

Patrick E. Lackey(14), Mihaela‐Rita Mihailescu(14), Jeffrey D. Evanseck(12), Adam H. Kensinger(9), Caylee L. Cunningham(8), Kendy A. Pellegrene(8), Caleb J. Frye(7), Joseph A. Makowski(7), Anna Marie Pyle(5), Ella J. Milback(5), Karla M. Neugebauer(4), Chengxin Zhang(3), Sarah E. Harris(3), Yang Zhang(2), Paulina Podszywalow‐Bartnicka(2), chengxin zhang(2), Nicole Mackenstein(2), Joshua A. Imperatore(2), Jackson M. Gordon(1), Leonard Schärfen(1)