Xiaoyu Yang

University of California, San Francisco — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

32h-index4.2kcitations116works6.02yr avg
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Research Topics

CRISPR and Genetic Engineering(12), RNA Research and Splicing(10), Distributed and Parallel Computing Systems(10), Scientific Computing and Data Management(10), Fluid Dynamics and Turbulent Flows(8)

Publications116 total

Cell type-specific inference from bulk RNA-sequencing data by integrating single-cell reference profiles via EPIC-unmix
Genome biology·2025Open Access
Functional characterization of Alzheimer’s disease genetic variants in microglia
UNC Libraries·2025Open Access
Mapping cis-regulatory chromatin contacts in neural cells links neuropsychiatric disorder risk variants to target genes
UNC Libraries·2025Open Access
SMART-Q: An Integrative Pipeline Quantifying Cell Type-Specific RNA Transcription
UNC Libraries·2025Open Access
Experimental investigation of wave-driven sediment resuspension in both following and opposing currents
Geo-Marine Letters·2025
Comparative characterization of human accelerated regions in neurons
Nature·2025· 15 cited
Exploration of the research hotspot and application rule of Tengligen in anti-digestive system tumor based on bibliometric analysis and data mining
Guidelines and Standards of Chinese Medicine·2025Open Access
One score to rule them all: regularized ensemble polygenic risk prediction with GWAS summary statistics
2024· 6 citedOpen Access
Accurate attenuation characterization in optical coherence tomography using multi-reference phantoms and deep learning
Biomedical Optics Express·2024· 4 citedOpen Access
Controlling for polygenic genetic confounding in epidemiologic association studies
Proceedings of the National Academy of Sciences·2024· 5 citedOpen Access
Multi-energy flow analysis of large energy networks motivated by CFD method
Energy·2024· 1 cited
The association between diets and periodontitis: a bidirectional two-sample Mendelian randomization study
Frontiers in Genetics·2024· 7 citedOpen Access
MYC phase separation selectively modulates the transcriptome
Nature Structural & Molecular Biology·2024· 45 citedOpen Access
An overview of PROTACs targeting MDM2 as a novel approach for cancer therapy
European Journal of Medicinal Chemistry·2024· 22 citedOpen Access
Author response for "Developments and applications of the OPTIMADE API for materials discovery, design, and data exchange"
2024
Controlling for polygenic genetic confounding in epidemiologic association studies
2024· 1 citedOpen Access
STNMDA: A Novel Model for Predicting Potential Microbe-Drug Associations with Structure-Aware Transformer
Current Bioinformatics·2024· 2 cited
Experimental Study on Pneumatic Anti-silting and Silt Reduction in the Tide Gates of Xinyi River Estuary Hub
Lecture notes in civil engineering·2024
Comparison of algorithms for the estimation of the optical attenuation coefficients in optical coherence tomography
2023
Functional characterization of Alzheimer’s disease genetic variants in microglia
Nature Genetics·2023· 72 citedOpen Access
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Frequent Co-authors

Yin Shen(7), Dana Gabuzda(6), Han Wu(5), Qin Jin(5), Liangxue Lai(5), Jingke Xie(4), Weikai Ge(4), Fangbing Chen(4), Zhen Ouyang(4), Quanjun Zhang(4), Chengdan Lai(4), Hui Shi(4), Kepin Wang(4), Hongjiang Liu(4), Ganghua Li(4), Shao‐Hua Wang(4), Zhenghui Liu(4), Michael Song(3), Xingjie Ren(3), Bingkun Li(3)