Lyam Baudry

University of Lausanne — Switzerland

Biochemistry, Genetics and Molecular Biology · Life Sciences

13h-index700citations34works15.52yr avg
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Research Topics

Genomics and Phylogenetic Studies(10), Genomics and Chromatin Dynamics(5), Chromosomal and Genetic Variations(5), Plant Disease Resistance and Genetics(5), Biofuel production and bioconversion(4)

Publications34 total

Ancient co-option of LTR retrotransposons as yeast centromeres
2025· 3 citedOpen Access
Orchestrating chromosome conformation capture analysis with Bioconductor
Nature Communications·2024· 28 citedOpen Access
Chromosomal assembly of the flat oyster (<i>Ostrea edulis</i> L.) genome as a new genetic resource for aquaculture
Evolutionary Applications·2022· 27 citedOpen Access
Chromosome-level genome assembly and annotation of two lineages of the ant Cataglyphis hispanica: stepping stones towards genomic studies of hybridogenesis and thermal adaptation in desert ants
Peer Community Journal·2022· 6 citedOpen Access
Chromosomal assembly of the flat oyster ( <i>Ostrea edulis</i> L.) genome as a new genetic ressource for aquaculture
2022· 2 citedOpen Access
Chromosome-level genome assembly and annotation of two lineages of the ant <i>Cataglyphis hispanica</i> : stepping stones towards genomic studies of hybridogenesis and thermal adaptation in desert ants
2022· 4 citedOpen Access
Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer <i>Adineta vaga</i>
Science Advances·2021· 62 citedOpen Access
Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga
Zenodo (CERN European Organization for Nuclear Research)·2021· 7 citedOpen Access
Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga
Zenodo (CERN European Organization for Nuclear Research)·2021· 3 citedOpen Access
Normalization of Chromosome Contact Maps: Matrix Balancing and Visualization
Methods in molecular biology·2021· 13 cited
Author Correction: Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization
Communications Biology·2021· 4 citedOpen Access
Chromosomal scale assembly of parasitic wasp genome reveals symbiotic virus colonization
Communications Biology·2021· 62 citedOpen Access
Computer vision for pattern detection in chromosome contact maps
Nature Communications·2020· 136 citedOpen Access
instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder
Genome biology·2020· 60 citedOpen Access
Homologous chromosomes in asexual rotifer <i>Adineta vaga</i> suggest automixis
2020· 16 citedOpen Access
Serpentine: a flexible 2D binning method for differential Hi-C analysis
Bioinformatics·2020· 24 citedOpen Access
Chromosight benchmarks and processed data
2020Open Access
Chromosight benchmarks and processed data
Zenodo (CERN European Organization for Nuclear Research)·2020Open Access
Chromosight benchmarks and processed data
Zenodo (CERN European Organization for Nuclear Research)·2020Open Access
Chromosight benchmarks and processed data
Figshare·2020Open Access
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Frequent Co-authors

Romain Koszul(27), Martial Marbouty(22), Nadège Guiglielmoni(12), Axel Cournac(11), Cyril Matthey-Doret(10), Rémi Montagne(8), Jean‐François Flot(8), Karine Labadie(6), Etienne Jourdier(6), Dante Poggi-Parodi(6), Yoan Vicq(6), Antoine Margeot(6), Pierrick Moreau(4), Benjamin Noël(4), Paul Simion(4), Antoine Houtain(4), Alessandro Derzelle(4), Émilien Nicolas(4), Marie Cariou(4), Florence Rodriguez Gaudray(4)