Alyxandria M. Schubert

Center for Devices and Radiological Health — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

20h-index17.4kcitations31works25.02yr avg
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Research Topics

Gut microbiota and health(18), Clostridium difficile and Clostridium perfringens research(15), Bacteriophages and microbial interactions(6), Microscopic Colitis(6), Epigenetics and DNA Methylation(4)

Publications27 total

Using machine learning models to predict the impact of template mismatches on polymerase chain reaction assay performance
Scientific Reports·2025· 2 citedOpen Access
Using Machine Learning Models to Predict the Impact of Template Mismatches on Polymerase Chain Reaction (PCR) Assay Performance
2024Open Access
Phage-specific immunity impairs efficacy of bacteriophage targeting Vancomycin Resistant Enterococcus in a murine model
Nature Communications·2024· 73 citedOpen Access
Phage-specific immune responses impair efficacy of phage therapy targeting VRE in a murine model
2023Open Access
The Gut Bacterial Community Potentiates Clostridioides difficile Infection Severity
mBio·2022· 43 citedOpen Access
The gut bacterial community potentiates <i>Clostridioides difficile</i> infection severity
2022· 2 citedOpen Access
Clearance of Clostridioides difficile Colonization Is Associated with Antibiotic-Specific Bacterial Changes
mSphere·2021· 26 citedOpen Access
Clearance of <i>Clostridioides difficile</i> colonization is associated with antibiotic-specific bacterial changes
2020Open Access
Microbiota of MR1 deficient mice confer resistance against Clostridium difficile infection
PLoS ONE·2019· 27 citedOpen Access
Bacteriophage Resistance Alters Antibiotic-Mediated Intestinal Expansion of Enterococci
Infection and Immunity·2019· 121 citedOpen Access
Bacteriophage resistance alters antibiotic mediated intestinal expansion of enterococci
2019· 5 citedOpen Access
Germinant Synergy Facilitates Clostridium difficile Spore Germination under Physiological Conditions
mSphere·2018· 47 citedOpen Access
The Evolution of Molecular Compatibility between Bacteriophage ΦX174 and its Host
Scientific Reports·2018· 6 citedOpen Access
Intestinal calcium and bile salts facilitate germination of Clostridium difficile spores
PLoS Pathogens·2017· 94 citedOpen Access
MAIT cells: Shaping the microbiome, contributing to <i>Clostridium difficile</i> infection
The Journal of Immunology·2017· 3 cited
Antibiotic-Induced Alterations of the Murine Gut Microbiota and Subsequent Effects on Colonization Resistance against Clostridium difficile
mBio·2015· 292 citedOpen Access
The Role of the Gut Microbiota in Colonization Resistance against Clostridium difficile.
Deep Blue (University of Michigan)·2015Open Access
Low prevalence of Clostridium septicum fecal carriage in an adult population
Anaerobe·2014· 16 citedOpen Access
Intra- and Interindividual Variations Mask Interspecies Variation in the Microbiota of Sympatric Peromyscus Populations
Applied and Environmental Microbiology·2014· 65 citedOpen Access
Microbiome Data Distinguish Patients with Clostridium difficile Infection and Non-C. difficile-Associated Diarrhea from Healthy Controls
mBio·2014· 336 citedOpen Access
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Frequent Co-authors

Patrick D. Schloss(13), Paul E. Carlson(10), Vincent B. Young(5), Hamide Sinani(5), Jessica L. Hastie(5), Sahar Abubucker(4), Nicola Segata(4), Johannes B. Goll(4), Jacques Izard(4), Brandi L. Cantarel(4), Beltran Rodriguez-Mueller(4), Mathangi Thiagarajan(4), Bernard Henrissat(4), Owen White(4), Scott T. Kelley(4), Barbara A. Methé(4), Dirk Gevers(4), Makedonka Mitreva(4), Curtis Huttenhower(4), Ashley D. Smith(4)