Peter D’Eustachio

Oregon State University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

73h-index43.4kcitations290works10.32yr avg
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Research Topics

Bioinformatics and Genomic Networks(66), Biomedical Text Mining and Ontologies(39), Microbial Metabolic Engineering and Bioproduction(25), Animal Genetics and Reproduction(20), Genomics and Phylogenetic Studies(18)

Publications283 total

Gramene 2025: expanded comparative genomics and pathway resources, integrated search, and pan-genome portals for crop research
Nucleic Acids Research·2025· 2 citedOpen Access
The Reactome Knowledgebase 2026
Nucleic Acids Research·2025· 4 citedOpen Access
The Ontogeny of Antigen-Binding Cells
Digital Commons - RU (Rockefeller University)·2025· 1 citedOpen Access
Advancing curation of viral life cycles, host interactions, and therapeutics in Reactome
Journal of Virology·2025· 1 citedOpen Access
A compendium of human gene functions derived from evolutionary modelling
Nature·2025· 26 citedOpen Access
AI-augmented human biocuration in Reactome
Faculty of 1000 Research Ltd·2025Open Access
Updates to the Alliance of Genome Resources central infrastructure
Genetics·2024· 54 citedOpen Access
Drug-target identification in COVID-19 disease mechanisms using computational systems biology approaches
Frontiers in Immunology·2024· 18 citedOpen Access
Perspectives on tracking data reuse across biodata resources
Bioinformatics Advances·2024· 2 citedOpen Access
Pathway-based, reaction-specific annotation of disease variants for elucidation of molecular phenotypes
Database·2024· 4 citedOpen Access
Unlocking biological insights: Reactome's comprehensive pathway analysis and developmental lineage path project
Faculty of 1000 Research Ltd·2024Open Access
Updates to the Alliance of Genome Resources Central Infrastructure Alliance of Genome Resources Consortium
2023· 3 citedOpen Access
Plant Reactome Knowledgebase: empowering plant pathway exploration and OMICS data analysis
Nucleic Acids Research·2023· 11 citedOpen Access
ChatGPT usage in the Reactome curation process
2023· 12 citedOpen Access
The Reactome Pathway Knowledgebase 2024
Nucleic Acids Research·2023· 1.1k citedOpen Access
Pathway-based, reaction-specific annotation of disease variants for elucidation of molecular phenotypes
2023Open Access
Biochemical pathways represented by Gene Ontology-Causal Activity Models identify distinct phenotypes resulting from mutations in pathways
Genetics·2023· 2 citedOpen Access
Illuminate the Functions of Dark Proteins Using the Reactome‐IDG Web Portal
Current Protocols·2023· 3 citedOpen Access
Functional Annotation of Disease Variants in Reactome
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Illuminating Dark Proteins using Reactome Pathways
2023· 6 citedOpen Access
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Frequent Co-authors

Lincoln Stein(22), Guanming Wu(14), Henning Hermjakob(14), Antonio Fabregat(12), Robin Haw(12), Lisa Matthews(12), Marc Gillespie(11), Bijay Jassal(11), Bruce May(9), Veronica Shamovsky(9), Konstantinos Sidiropoulos(8), M Orlic-Milacic(8), Karen Rothfels(8), Joel Weiser(8), Guilherme Viteri(7), Pankaj Jaiswal(7), David Croft(7), Mark G. Rush(7), Phani Garapati(6), Sushma Naithani(6)