Ramy Arnaout

Medicine · Health Sciences

29h-index5.4kcitations103works0.92yr avg
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Research Topics

SARS-CoV-2 detection and testing(19), T-cell and B-cell Immunology(16), SARS-CoV-2 and COVID-19 Research(16), COVID-19 diagnosis using AI(10), HIV Research and Treatment(9)

Publications103 total

$\textit{sentropy}$: A Python Package for Revealing Hidden Differences in Complex Datasets
PubMed Central·2026Open Access
What’s not to learn? AI meets parasitology
Journal of Clinical Microbiology·2025Open Access
Which Similarity-Sensitive Entropy (S-entropy)?
ArXiv.org·2025Open Access
HuBIE: The Human Blood Immunome Encyclopedia Of TCRs and BCRs in Bloodstream Infections and Cancer
2025Open Access
GEM-T: Generative Tabular Data via Fitting Moments
arXiv (Cornell University)·2025Open Access
Author Reply to Peer Reviews of Contrasting Effects of SARS-CoV-2 Vaccination vs. Infection on Antibody and TCR Repertoires
2025
X-Factor: Quality Is a Dataset-Intrinsic Property.
PubMed·2025Open Access
Comparative Outcomes of Babesiosis in Immunocompromised and Nonimmunocompromised Hosts: A Multicenter Cohort Study
Clinical Infectious Diseases·2025· 2 cited
<i>lucie</i> : An Improved Python Package for Loading Datasets from the UCI Machine Learning Repository
2024· 5 citedOpen Access
$\textit{lucie}$: An Improved Python Package for Loading Datasets from the UCI Machine Learning Repository
arXiv (Cornell University)·2024Open Access
Beyond Size and Class Balance: Alpha as a New Dataset Quality Metric for Deep Learning
PubMed·2024Open Access
A 3-Month Comparison of Blueberry and Date Consumption among Older Adults: Rationale, Protocol, and Initial Recruitment for a Randomized Controlled Trial (Preprint)
2024Open Access
ct2vl: A Robust Public Resource for Converting SARS-CoV-2 Ct Values to Viral Loads
Viruses·2024· 4 citedOpen Access
SARS-CoV-2 live virus culture and sample freeze-thaw stability
Diagnostic Microbiology and Infectious Disease·2024· 2 cited
The Coviral Portal: Multi-Cohort Viral Loads and Antigen-Test Virtual Trials for COVID-19
ASEAN Journal of Psychiatry·2024Open Access
$\textit{sentropy}$: A Python Package for Revealing Hidden Differences in Complex Datasets
PubMed·2023· 1 citedOpen Access
Scaling Monte-Carlo-Based Inference on Antibody and TCR Repertoires
PubMed·2023· 1 citedOpen Access
Universal PCR for bacteria, mycobacteria, and fungi: a 10-year retrospective review of clinical indications and patient outcomes
Journal of Clinical Microbiology·2023· 14 citedOpen Access
Case report and mini-review: Sarcina ventriculi in the stomach of an 80-year-old female
Diagnostic Microbiology and Infectious Disease·2023· 3 cited
Contrasting Effects of SARS-CoV-2 Vaccination vs. Infection on Antibody and TCR Repertoires
2023· 1 citedOpen Access
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Frequent Co-authors

James E. Kirby(11), Cody Callahan(8), Annie Cheng(7), Rose Lee(6), Rima Arnaout(5), Martin A. Nowak(5), Stefan Riedel(5), Rohit Arora(5), Ghee Rye Lee(4), Kenny Smith(4), Dominik Wodarz(4), Chad Nusbaum(3), Jeffrey D. Lifson(3), Joseph Kaplinsky(3), Sanjucta Dutta(3), Tracey Honan(2), Ali Madani(2), Mohammad R. K. Mofrad(2), Jesse Theisen‐Toupal(2), Sergei B. Koralov(2)