John L. Darcy

University of Hawaiʻi at Mānoa — United States

Environmental Science · Physical Sciences

27h-index4.1kcitations63works0.52yr avg
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Research Topics

Microbial Community Ecology and Physiology(39), Polar Research and Ecology(29), Gut microbiota and health(17), Geology and Paleoclimatology Research(9), Genomics and Phylogenetic Studies(7)

Publications63 total

SVEP1 Upregulation Is a Prominent Molecular Response to Dietary Sodium Loading and Correlates with Inverse Salt Sensitivity
2025Open Access
Diversity, connectivity and negative interactions define robust microbiome networks across land, stream, and sea
2025· 1 citedOpen Access
Microbiomes and metabolomes of dominant coral reef primary producers illustrate a potential role for immunolipids in marine symbioses
Communications Biology·2023· 23 citedOpen Access
A ridge-to-reef ecosystem microbial census reveals environmental reservoirs for animal and plant microbiomes
Proceedings of the National Academy of Sciences·2022· 20 citedOpen Access
specificity: an R package for analysis of feature specificity to environmental and higher dimensional variables, applied to microbiome species data
Environmental Microbiome·2022· 18 citedOpen Access
Microbial biogeochemistry and phosphorus limitation in cryoconite holes on glaciers across the Taylor Valley, McMurdo Dry Valleys, Antarctica
Biogeochemistry·2022· 23 cited
<i>specificity</i> : an R package for analysis of feature specificity to environmental and higher dimensional variables, applied to microbiome species data
2021· 1 citedOpen Access
Gullies and Moraines Are Islands of Biodiversity in an Arid, Mountain Landscape, Asgard Range, Antarctica
Frontiers in Microbiology·2021· 12 citedOpen Access
Insights into an undescribed high‐elevation lake (6,170 m a.s.l.) on Volcán Llullaillaco: A physical and microbiological view
Aquatic Conservation Marine and Freshwater Ecosystems·2021· 4 cited
Hawaiian Fungal Amplicon Sequence Variants Reveal Otherwise Hidden Biogeography
Microbial Ecology·2021· 30 cited
Multiple‐trophic patterns of primary succession following retreat of a high‐elevation glacier
Ecosphere·2021· 33 citedOpen Access
Hawaii elevation data for waimea microbe paper
Figshare·2021Open Access
The Rich Get Richer: Cryoconite Holes on Antarctic Glaciers with More Microbes Accumulate Diversity More Rapidly with Size, Independent of Local Biogeochemistry
AGU Fall Meeting Abstracts·2020
Microbial biogeochemistry and nutrient limitations in cryoconite hole sediments across the Taylor Dry Valley, Antarctica
AGU Fall Meeting Abstracts·2020
Microbial Species–Area Relationships in Antarctic Cryoconite Holes Depend on Productivity
Microorganisms·2020· 12 citedOpen Access
Fungal communities living within leaves of native Hawaiian dicots are structured by landscape‐scale variables as well as by host plants
Molecular Ecology·2020· 37 cited
A phylogenetic model for the recruitment of species into microbial communities and application to studies of the human microbiome
The ISME Journal·2020· 32 citedOpen Access
Of Microbes and Mummies: Tales of Microbial Activity and Inactivity at 6000 m a.s.l.
2020· 2 cited
Cryoconite Holes Sequencing Data
Figshare·2020Open Access
Evidence for phosphorus limitation in high-elevation unvegetated soils, Niwot Ridge, Colorado
Biogeochemistry·2019· 19 cited
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Frequent Co-authors

Steven K. Schmidt(36), Dorota L. Porazinska(17), Pacifica Sommers(13), Lara Vimercati(11), Diana R. Nemergut(10), Eli M. S. Gendron(10), Adam J. Solon(10), Ryan C. Lynch(7), Anthony S. Amend(7), Joseph E. Knelman(6), Michael S. Robeson(5), Nicole A. Hynson(5), Sean O. I. Swift(5), Andrew J. King(4), Alex Washburne(4), Justin D. Silverman(4), Dominic J. Bennett(4), Sayan Mukherjee(4), Noah Fierer(4), Lawrence A. David(4)