Daniel T. Zhang

Okayama University — Japan

Biochemistry, Genetics and Molecular Biology · Life Sciences

6h-index80citations17works2.62yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

Protein Structure and Dynamics(7), Advanced Chemical Physics Studies(4), Machine Learning in Materials Science(4), Spectroscopy and Quantum Chemical Studies(3), Complex Network Analysis Techniques(2)

Publications17 total

Estimating Full Path Lengths and Kinetics from Partial Path Transition Interface Sampling Simulations
arXiv (Cornell University)·2026Open Access
Generalized Path Reweighting and History-Dependent Free Energies
arXiv (Cornell University)·2026Open Access
Generalized Path Reweighting and History-Dependent Free Energies
ArXiv.org·2026Open Access
Membrane Pore Formation Unveiled by ∞RETIS Path Sampling: From Thinning to Flip-Flop
Journal of Chemical Theory and Computation·2026Open Access
Path sampling challenges in large biomolecular systems: RETIS and REPPTIS for ABL-imatinib kinetics
Biophysical Journal·2025· 2 citedOpen Access
PyRETIS 3: Conquering rare and slow events without boundaries
Journal of Computational Chemistry·2024· 9 citedOpen Access
Highly parallelizable path sampling with minimal rejections using asynchronous replica exchange and infinite swaps
Proceedings of the National Academy of Sciences·2024· 7 citedOpen Access
Path sampling with memory reduction and replica exchange to reach long permeation timescales
Biophysical Journal·2023· 8 citedOpen Access
Enhanced path sampling using subtrajectory Monte Carlo moves
The Journal of Chemical Physics·2022· 9 citedOpen Access
Exchanging Replicas with Unequal Cost, Infinitely and Permanently
The Journal of Physical Chemistry A·2022· 10 citedOpen Access
Enhanced path sampling using subtrajectory Monte Carlo moves
arXiv (Cornell University)·2022· 1 citedOpen Access
Equation of state for confined fluids
The Journal of Chemical Physics·2022· 6 citedOpen Access
Exchanging replicas with unequal cost, infinitely and permanently
arXiv (Cornell University)·2022Open Access
Online Boosting for Multilabel Ranking with Top-k Feedback
arXiv (Cornell University)·2019Open Access
Online Multiclass Boosting with Bandit Feedback
arXiv (Cornell University)·2018· 1 citedOpen Access
A Data Science Approach to Understanding Residential Water Contamination in Flint
2017· 26 citedOpen Access
Data Science in Service of Performing Arts: Applying Machine Learning to Predicting Audience Preferences
arXiv (Cornell University)·2016· 1 citedOpen Access

Frequent Co-authors

Titus S. van Erp(11), An Ghysels(6), Sander Roet(4), Wouter Vervust(4), Enrico Riccardi(4), Elias Wils(3), Sina Safaei(3), Alex Chojnacki(2), Chengyu Dai(2), Jacob Abernethy(2), Eric M. Schwartz(2), Lukas Baldauf(2), Young Hun Jung(2), Ambuj Tewari(2), Arya Farahi(1), Guangsha Shi(1), Jared Webb(1), Anders Lervik(1), Vilde Bråten(1), Morten Hammer(1)