Gabrielle Rocap

University of Washington — United States

Environmental Science · Physical Sciences

37h-index8.0kcitations71works2.62yr avg
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Research Topics

Microbial Community Ecology and Physiology(54), Genomics and Phylogenetic Studies(24), Marine and coastal ecosystems(24), Protist diversity and phylogeny(19), Marine Biology and Ecology Research(6)

Publications71 total

Marine Community Metabolomes in the Eastern Tropical North Pacific Oxygen Deficient Zone Reveal Glycine Betaine as a Metabolic Link Between <i>Prochlorococcus</i> and <scp>SAR11</scp>
Environmental Microbiology·2025· 2 citedOpen Access
<scp>ASAFind</scp> 2.0: multi‐class protein targeting prediction for diatoms and algae with complex plastids
The Plant Journal·2025· 6 citedOpen Access
Marine community metabolomes in the eastern tropical North Pacific Oxygen Deficient Zone reveal glycine betaine as a metabolic link between Prochlorococcus and SAR11
2025Open Access
Cyanobacteria from marine oxygen-deficient zones encode both form I and form II Rubiscos
Proceedings of the National Academy of Sciences·2024· 5 citedOpen Access
Cyanobacteria from marine oxygen deficient zones encode both form I and form II rubiscos
2024Open Access
Hi-C assembled genomes of estuarine populations reveal virus-microbe associations and a broad interaction range of a cyanophage
2023Open Access
Comparison of different versions of SignalP and TargetP for diatom plastid protein predictions with ASAFind
arXiv (Cornell University)·2023· 2 citedOpen Access
Comparison of different versions of SignalP and TargetP for diatom\n plastid protein predictions with ASAFind
arXiv (Cornell University)·2023· 4 citedOpen Access
Multi class intracellular protein targeting predictions in diatoms and other algae with complex plastids: ASAFind 2.0
arXiv (Cornell University)·2023· 2 citedOpen Access
Two Metatranscriptomic Profiles through Low-Dissolved-Oxygen Waters (DO, 0 to 33 µM) in the Eastern Tropical North Pacific Ocean
Microbiology Resource Announcements·2022· 5 citedOpen Access
Protein cycling in the eastern tropical North Pacific oxygen‐deficient zone: A de novo‐discovery peptidomic approach
Limnology and Oceanography·2022· 3 cited
Predicting Metabolites of Marine Picoeukaryotes using In Silico Metabolomics
AGU Fall Meeting Abstracts·2020
Cyanophage host‐derived genes reflect contrasting selective pressures with depth in the oxic and anoxic water column of the Eastern Tropical North Pacific
Environmental Microbiology·2020· 22 citedOpen Access
Cyanobacteria and cyanophage contributions to carbon and nitrogen cycling in an oligotrophic oxygen-deficient zone
The ISME Journal·2019· 91 citedOpen Access
Complete arsenic-based respiratory cycle in the marine microbial communities of pelagic oxygen-deficient zones
Proceedings of the National Academy of Sciences·2019· 60 citedOpen Access
Marine <i>Synechococcus</i> isolates representing globally abundant genomic lineages demonstrate a unique evolutionary path of genome reduction without a decrease in GC content
Environmental Microbiology·2019· 40 cited
Discovery of several novel, widespread, and ecologically distinct marine <i>Thaumarchaeota</i> viruses that encode <i>amoC</i> nitrification genes
The ISME Journal·2018· 150 citedOpen Access
Utilization of urea and cyanate in waters overlying and within the eastern tropical north Pacific oxygen deficient zone
FEMS Microbiology Ecology·2018· 47 citedOpen Access
Niche Partitioning of the N Cycling Microbial Community of an Offshore Oxygen Deficient Zone
Frontiers in Microbiology·2017· 94 citedOpen Access
Effect of the environment on horizontal gene transfer between bacteria and archaea
PeerJ·2017· 103 citedOpen Access
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Frequent Co-authors

Sallie W. Chisholm(11), Nathan A. Ahlgren(8), Clara A. Fuchsman(8), Lisa R. Moore(7), Cedar McKay(6), Claire S. Ting(5), Jaclyn K. Saunders(5), Ansgar Gruber(4), Mak A. Saito(4), K. Roache-Johnson(4), Eric A. Webb(3), Miroslav Obornı́k(3), Allan H. Devol(3), R. Eric Collins(3), Michael Carlson(3), Rose Ann Cattolico(3), Michael A. Jacobs(3), Frank W. Larimer(2), Jane E. Lamerdin(2), Anton F. Post(2)