Zamin Iqbal

European Bioinformatics Institute — United Kingdom

Biochemistry, Genetics and Molecular Biology · Life Sciences

51h-index34.2kcitations184works7.32yr avg
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Research Topics

Genomics and Phylogenetic Studies(77), Mycobacterium research and diagnosis(49), Tuberculosis Research and Epidemiology(41), Antibiotic Resistance in Bacteria(20), RNA and protein synthesis mechanisms(19)

Publications176 total

Understanding Molecular Basis of PTPN11-Related Diseases.
PubMed·2025
Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi
Genome Medicine·2025Open Access
Rapidly and reproducibly building a comprehensive catalogue of resistance-associated variants for <i>M. tuberculosis</i>
2025Open Access
Pre- and postantibiotic epoch: The historical spread of antimicrobial resistance
Science·2025· 7 citedOpen Access
Efficient sequence alignment against millions of prokaryotic genomes with LexicMap
Nature Biotechnology·2025· 4 citedOpen Access
Clustering of plasmid genomes for genomic epidemiology by using rearrangement distances, with pling
2025Open Access
Complete genomes reveal the full extent of <i>Mycobacterium tuberculosis</i> complex diversity across evolutionary scales
2025· 1 citedOpen Access
UShER-TB: Scalable, Comprehensive, Accessible Phylogenomic Analysis of <i>Mycobacterium tuberculosis</i>
2025Open Access
TBpore cluster: A novel phylogenetic pipeline for tuberculosis transmission studies using nanopore next-generation sequencing data
PLoS ONE·2025Open Access
Amira: detection of AMR genes directly from long reads using gene-space <i>de Bruijn</i> graphs
2025Open Access
Comparing umbilical cord arterial blood gas findings in pregnancies with and without gestational diabetes mellitus following elective cesarean section: a multicenter retrospective cohort study in Iran
BMC Pregnancy and Childbirth·2025Open Access
Efficient and robust search of microbial genomes via phylogenetic compression
Nature Methods·2025· 11 citedOpen Access
Tracking clonal and plasmid transmission in colistin- and carbapenem-resistant <i>Klebsiella pneumoniae</i>
mSystems·2025· 8 citedOpen Access
Deep Learning Based Autonomous Robotic Grasping and Sorting System for Industry 4.0
2024
Genomic perspective on the bacillus causing paratyphoid B fever
Nature Communications·2024· 3 citedOpen Access
Whole genome sequencing of M. tuberculosis for disease control in high-burden settings: study protocol for a cluster randomized controlled trial evaluating different community-wide intervention strategies in rural Madagascar
Trials·2024Open Access
Applying rearrangement distances to enable plasmid epidemiology with pling
Microbial Genomics·2024· 26 citedOpen Access
Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent <i>Salmonella</i> Typhi
2024· 5 citedOpen Access
Pre and Post antibiotic epoch: insights into the historical spread of antimicrobial resistance
2024· 8 citedOpen Access
CELEBRIMBOR: core and accessory genes from metagenomes
Bioinformatics·2024· 3 citedOpen Access
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Frequent Co-authors

A Sarah Walker(25), Derrick W. Crook(23), Gil McVean(18), Tim Peto(18), Martin Hunt(14), Nazir Ismail(12), Stefan Niemann(12), Shaheed Vally Omar(10), Phelim Bradley(10), Daniel J. Wilson(10), E. Grace Smith(10), Thomas A. Kohl(9), David A. Clifton(9), Daniela María Cirillo(9), Sarah G. Earle(8), Kayzad Nilgiriwala(8), Philip W. Fowler(8), Camilla Rodrigues(8), Matthias Merker(8), Maha Farhat(7)