Stephen R. Holbrook

Biochemistry, Genetics and Molecular Biology · Life Sciences

35h-index5.7kcitations119works0.02yr avg
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Research Topics

RNA and protein synthesis mechanisms(63), RNA modifications and cancer(28), DNA and Nucleic Acid Chemistry(27), Machine Learning in Bioinformatics(18), Enzyme Structure and Function(16)

Publications119 total

Histogram of differences in the endpoints of the domains
Figshare·2011Open Access
Crystallisation of Nucleic Acids
Encyclopedia of Life Sciences·2010· 1 cited
ESTIMATING SUPPORT FOR PROTEIN-PROTEIN INTERACTION DATA WITH APPLICATIONS TO FUNCTION PREDICTION
Computational Systems Bioinformatics·2008· 14 cited
Terminator Detection by Support Vector Machine Utilizing a Stochastic Context-Free \nGrammar
eScholarship (California Digital Library)·2008Open Access
Structural Principles From Large RNAs
Annual Review of Biophysics·2008· 105 cited
Consistent dissection of the protein interaction network by combining global and local metrics
Genome biology·2007· 28 citedOpen Access
Faculty Opinions recommendation of Identification of new noncoding RNAs in Listeria monocytogenes and prediction of mRNA targets.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2007
Terminator Detection by Support Vector Machine Utilizing a Stochastic Context-Free Grammar
2007· 1 cited
Terminator Detection by Support Vector Machine Utilizing aStochastic Context-Free Grammar
University of North Texas Digital Library (University of North Texas)·2006Open Access
Biclustering Protein Complex Interactions with a Biclique FindingAlgorithm
eScholarship (California Digital Library)·2006Open Access
Biclustering Protein Complex Interactions with a Biclique Finding Algorithm
Proceedings·2006· 38 cited
Faculty Opinions recommendation of A backbone-based theory of protein folding.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2006
PSoL: a positive sample only learning algorithm for finding non-coding RNA genes
Bioinformatics·2006· 99 cited
Novel crystal form of the ColE1 Rom protein
Acta Crystallographica Section D Biological Crystallography·2006· 8 cited
The Crystal Structure at 1.5 Å Resolution of an RNA Octamer Duplex Containing Tandem G·U Basepairs
Biophysical Journal·2006· 5 citedOpen Access
Identification of conserved protein modules from multiple organisms using transitive closure and cliques in protein interaction networks
The FASEB Journal·2006
The RNA Ontology Consortium: An open invitation to the RNA community
RNA·2006· 69 citedOpen Access
Faculty Opinions recommendation of The widespread impact of mammalian MicroRNAs on mRNA repression and evolution.
Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature·2006
Transitive closure and metric inequality of weighted graphs: detecting protein interaction modules using cliques
International Journal of Data Mining and Bioinformatics·2006· 24 cited
Transitive Closure and Metric Inequality of Weighted Graphs – Detecting Protein Interaction Modules Using Cliques
University of North Texas Digital Library (University of North Texas)·2006· 4 citedOpen Access
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Frequent Co-authors

Sung‐Hou Kim(14), Chris Ding(8), Elizabeth L. Holbrook(6), Joel L. Sussman(5), Steven E. Brenner(4), Katrien Baeyens(4), Inna Dubchak(3), R. Wade Warrant(3), George M. Church(3), Paul D. Adams(3), Richard J. Carter(3), Xiaofeng He(3), S H Kim(2), S.-H. Kim(2), Alexei V. Kazantsev(2), Angelika A. Krivenko(2), Daniel J. Harrington(2), Norman R. Pace(2), Aziz Sancar(2), Carol Mimura(2)