Ralf Koebnik

Centre de Coopération Internationale en Recherche Agronomique pour le Développement — France

Agricultural and Biological Sciences · Life Sciences

47h-index9.4kcitations234works1.92yr avg
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Research Topics

Plant Pathogenic Bacteria Studies(183), Plant-Microbe Interactions and Immunity(117), Legume Nitrogen Fixing Symbiosis(88), Genomics and Phylogenetic Studies(43), Plant pathogens and resistance mechanisms(27)

Publications234 total

Large- and small-scale population structure of <i>Xanthomonas oryzae</i> pv. <i>oryzicola</i> , a bacterial pathogen of rice
Applied and Environmental Microbiology·2025Open Access
Functional replacement of ancestral antibacterial secretion system in a bacterial plant pathogen
Nature Ecology & Evolution·2025Open Access
EuroXanth DokuWiki data backup
Zenodo (CERN European Organization for Nuclear Research)·2025Open Access
Effectidor II: a pan-genomic AI-based algorithm for the prediction of type III secretion system effectors
Bioinformatics·2025· 5 citedOpen Access
Evolutionary and Epidemiological Insights from Historical and Modern Genomes of <i>Xanthomonas oryzae</i> pv. <i>oryzicola</i>, the Causal Agent of Bacterial Leaf Streak of Rice
Molecular Plant-Microbe Interactions·2024· 2 citedOpen Access
Comparative transcriptomics reveals a highly polymorphic Xanthomonas HrpG virulence regulon
BMC Genomics·2024· 8 citedOpen Access
Draft genome sequence of <i>Xanthomonas arboricola</i> pv. pruni PVCT 262.1 isolated from <i>Prunus dulcis</i> in italy
Microbiology Resource Announcements·2024· 2 citedOpen Access
Comparative transcriptomics reveal a highly polymorphic <i>Xanthomonas</i> HrpG virulence regulon
2024Open Access
Celebrating the 20th anniversary of the first Xanthomonas genome sequences – how genomics revolutionized taxonomy, provided insight into the emergence of pathogenic bacteria, enabled new fundamental discoveries and helped developing novel control measures – a perspective from the French network on Xanthomonads
Peer Community Journal·2024· 2 citedOpen Access
Celebrating the 20th Anniversary of the First Xanthomonas Genome Sequences – How Genomics Revolutionized Taxonomy, Provided Insight into the Emergence of Pathogenic Bacteria, Enabled New Fundamental Discoveries and Helped Developing Novel Control Measures – A Perspective from the French Network on Xanthomonads
SPIRE - Sciences Po Institutional REpository·2024Open Access
A Community-Curated DokuWiki Resource on Diagnostics, Diversity, Pathogenicity, and Genetic Control of Xanthomonads
Molecular Plant-Microbe Interactions·2023· 23 citedOpen Access
High genomic plasticity and unique features of Xanthomonas translucens pv. graminis revealed through comparative analysis of complete genome sequences
BMC Genomics·2023· 1 citedOpen Access
High genomic plasticity and unique features of Xanthomonas translucens pv. graminis revealed through comparative analysis of complete genome sequences
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
High genomic plasticity and unique features of Xanthomonas translucens pv. graminis revealed through comparative analysis of complete genome sequences
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
EuroXanth DokuWiki data backup
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Celebrating the 20th Anniversary of the First Xanthomonas Genome Sequences – How Genomics Revolutionized Taxonomy, Provided Insight into the Emergence of Pathogenic Bacteria, Enabled New Fundamental Discoveries and Helped Developing Novel Control Measures – A Perspective from the French Network on Xanthomonads
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Celebrating the 20th Anniversary of the First Xanthomonas Genome Sequences – How Genomics Revolutionized Taxonomy, Provided Insight into the Emergence of Pathogenic Bacteria, Enabled New Fundamental Discoveries and Helped Developing Novel Control Measures – A Perspective from the French Network on Xanthomonads
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Celebrating the 20th Anniversary of the First Xanthomonas Genome Sequences – How Genomics Revolutionized Taxonomy, Provided Insight into the Emergence of Pathogenic Bacteria, Enabled New Fundamental Discoveries and Helped Developing Novel Control Measures – A Perspective from the French Network on Xanthomonads
Zenodo (CERN European Organization for Nuclear Research)·2023· 1 citedOpen Access
High genomic plasticity and unique features of <i>Xanthomonas translucens</i> pv. <i>graminis</i> revealed through comparative analysis of complete genome sequences
2023Open Access
A minisatellite-based MLVA for deciphering the global epidemiology of the bacterial cassava pathogen Xanthomonas phaseoli pv. manihotis
PLoS ONE·2023· 4 citedOpen Access
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Frequent Co-authors

Boris Szurek(16), Valérie Verdier(16), Marie‐Agnès Jacques(8), Lionel Gagnevin(7), Olivier Pruvost(7), Jens Boch(6), Jan E. Leach(6), Sébastien Carrère(6), Emmanuelle Lauber(6), Stéphane Poussier(6), Matthieu Arlat(5), Armelle Darrasse(5), Laurent D. Noël(5), Kehinde Adewole Oyeniran(5), Jürg P. Rosenbusch(4), Prabhu B. Patil(4), Robert P. Ryan(4), Frank F. White(4), Sébastien Cunnac(4), Tristan Boureau(4)