Jaebum Kim

Konkuk University — South Korea

Biochemistry, Genetics and Molecular Biology · Life Sciences

28h-index5.8kcitations129works2.32yr avg
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Research Topics

Genomics and Phylogenetic Studies(46), Chromosomal and Genetic Variations(21), Genetic and phenotypic traits in livestock(17), RNA and protein synthesis mechanisms(11), Bioinformatics and Genomic Networks(9)

Publications129 total

Regulatory roles of long non-coding RNAs in minipigs revealed by cross-breed and cross-tissue transcriptomic analyses
Scientific Reports·2025· 1 citedOpen Access
Assessing the impact of reference genomes on the quality of a reference-guided genome assembly
2025
Metagenomic insights and biosynthetic potential of <i>Candidatus</i> Entotheonella symbiont associated with <i>Halichondria</i> marine sponges
Microbiology Spectrum·2024· 6 citedOpen Access
Histone methyltransferase NSD modulates gene silencing mechanisms on Drosophila chromosome 4
Biochemical and Biophysical Research Communications·2024
A chromosome-level genome assembly of the Korean minipig (Sus scrofa)
Scientific Data·2024· 4 citedOpen Access
Anti-Influenza A Potential of Tagetes erecta Linn. Extract Based on Bioinformatics Analysis and In Vitro Assays
International Journal of Molecular Sciences·2024· 1 citedOpen Access
Identification and characterization of structural variants related to meat quality in pigs using chromosome-level genome assemblies
BMC Genomics·2024· 4 citedOpen Access
PAPipe: A Pipeline for Comprehensive Population Genetic Analysis
Molecular Biology and Evolution·2024· 2 citedOpen Access
A chromosome-level genome assembly of the Korean crossbred pig Nanchukmacdon (Sus scrofa)
Scientific Data·2023· 7 citedOpen Access
Identification of the Tagetes erecta Linn. Extract’s potentials against influenza A based on bioinformatics analysis and experimental study
Research Square (Research Square)·2023Open Access
Brain structure and allelic associations in Alzheimer's disease
CNS Neuroscience & Therapeutics·2022· 7 citedOpen Access
Reference-based read clustering improves the de novo genome assembly of microbial strains
Computational and Structural Biotechnology Journal·2022· 1 citedOpen Access
Neuroprotective effects of linear ubiquitin E3 ligase against aging-induced DNA damage and amyloid β neurotoxicity in the brain of Drosophila melanogaster
Biochemical and Biophysical Research Communications·2022· 6 cited
Evolution of the ancestral mammalian karyotype and syntenic regions
Proceedings of the National Academy of Sciences·2022· 92 citedOpen Access
msPIPE: a pipeline for the analysis and visualization of whole-genome bisulfite sequencing data
BMC Bioinformatics·2022· 15 citedOpen Access
Program Committee
2022Open Access
Additional file 2 of msPIPE: a pipeline for the analysis and visualization of whole-genome bisulfite sequencing data
Figshare·2022Open Access
Generation and application of pseudo–long reads for metagenome assembly
GigaScience·2022· 6 citedOpen Access
Molecular mechanisms of embryonic tail development in the self-fertilizing mangrove killifish <i>Kryptolebias marmoratus</i>
Development·2021· 5 citedOpen Access
Comparative methylation and RNA-seq expression analysis in CpG context to identify genes involved in Backfat vs. Liver diversification in Nanchukmacdon Pig
BMC Genomics·2021· 9 citedOpen Access
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Frequent Co-authors

Denis M. Larkin(13), Jian Ma(13), Harris A. Lewin(12), Marta Farré(9), Jongin Lee(8), Mikang Sim(7), Guojie Zhang(6), Loretta Auvil(5), Boris Capitanu(5), Joana Damas(5), Daehwan Lee(5), Younhee Ko(5), Daehong Kwon(5), Oliver A. Ryder(4), Saurabh Sinha(4), Gyu Seok Cho(4), Dajeong Lim(4), Jian Wang(3), Jun Wang(3), Qiye Li(3)