Tyler Luchko

California State University, Fullerton — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

19h-index3.1kcitations47works0.22yr avg
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Research Topics

Protein Structure and Dynamics(16), Spectroscopy and Quantum Chemical Studies(13), Microtubule and mitosis dynamics(9), Enzyme Structure and Function(6), Computational Drug Discovery Methods(5)

Publications46 total

Lysine acetylation plays a role in RNA binding protein-regulated alternative pre-mRNA splicing
2025Open Access
BPS2025 - Predicting generalized-born molecular solvation energies using an active-learning neural network ensemble
Biophysical Journal·2025
BPS2025 - Predicting bridging waters in protein-ligand interfaces: A 3D-RISM approach
Biophysical Journal·2025
BPS2025 - Computational modeling of magnesium ion solvation around Escherichia coli 70S ribosome using 3D reference interaction site model of molecular solvation
Biophysical Journal·2025
BPS2025 - Molecular simulation with 3D-RISM: Using hybrid Monte Carlo for efficient sampling
Biophysical Journal·2025
BPS2025 - Automated, efficient, and rigorous absolute binding free energy calculations
Biophysical Journal·2025
An interdisciplinary effort to integrate coding into science courses
Nature Computational Science·2024· 1 cited
Unstructured linker regions play a role in the differential splicing activities of paralogous RNA binding proteins PTBP1 and PTBP2
Journal of Biological Chemistry·2024· 1 citedOpen Access
Modeling the aqueous ionic environment of biomolecules with the 3D-reference interaction site model of molecular solvation
Biophysical Journal·2024
AmberTools
Journal of Chemical Information and Modeling·2023· 1.6k citedOpen Access
Identifying Systematic Force Field Errors Using a 3D-RISM Element Counting Correction
Molecules·2023· 3 citedOpen Access
Molecular Dynamics Simulations of the Cardiac Ryanodine Receptor Type 2 (RyR2) Gating Mechanism
The Journal of Physical Chemistry B·2022· 6 citedOpen Access
The role of subunit cooperativity on ryanodine receptor 2 calcium signaling
Biophysical Journal·2022· 12 citedOpen Access
Accelerating the 3D reference interaction site model theory of molecular solvation with treecode summation and cut‐offs
Journal of Computational Chemistry·2022· 10 citedOpen Access
Integral equation models for solvent in macromolecular crystals
The Journal of Chemical Physics·2022· 5 citedOpen Access
Accelerating the 3D-RISM theory of molecular solvation with treecode summation and cut-offs
arXiv (Cornell University)·2021Open Access
Accelerating the 3D-RISM theory of molecular solvation with treecode\n summation and cut-offs
arXiv (Cornell University)·2021Open Access
Computational Analysis of Binding Interactions between the Ryanodine Receptor Type 2 and Calmodulin
The Journal of Physical Chemistry B·2021· 7 cited
Amber 2021: Reference Manual
Open Repository and Bibliography (University of Luxembourg)·2021· 171 cited
An online repository of solvation thermodynamic and structural maps of SARS-CoV-2 targets
Journal of Computer-Aided Molecular Design·2020· 14 citedOpen Access
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Frequent Co-authors

David A. Case(15), Jack A. Tuszyński(12), Andriy Kovalenko(6), Darrin M. York(5), George M. Giambaşu(5), J. Torin Huzil(5), Tom Kurtzman(4), Eric Carpenter(4), Michael I. Barton(4), Daniel R. Roe(3), Carlos Simmerling(3), Sergey Gusarov(3), Richard F. Ludueña(3), In Suk Joung(3), D’Artagnan Greene(3), Yohannes Shiferaw(3), Leighton Wilson(3), Robert Krasny(3), Hasan Metin Aktulga(2), Kellon Belfon(2)