Brian Carrillo

SIB Swiss Institute of Bioinformatics — Switzerland

Chemistry · Physical Sciences

4h-index185citations12works0.02yr avg
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Research Topics

Mass Spectrometry Techniques and Applications(11), Advanced Proteomics Techniques and Applications(10), Metabolomics and Mass Spectrometry Studies(6), Analytical Chemistry and Chromatography(2), Machine Learning in Bioinformatics(2)

Publications12 total

Building a continuous benchmarking ecosystem in bioinformatics
PLoS Computational Biology·2025Open Access
Accurate samples for testing mass spectrometry based peptide quantification algorithms
2010
Methods for combining peptide intensities to estimate relative protein abundance
Bioinformatics·2009· 64 citedOpen Access
A Bayesian approach to peptide identification using Accurate Mass and Time tags from LC-FTICR-MS proteomics experiments
2008· 3 cited
Quantification of uncertainty of peptide retention time predictions from a sequence-based model in LC-MS/MS proteomics experiments
Conference proceedings·2007· 2 cited
Methods for peptide identification by spectral comparison
Proteome Science·2007· 84 citedOpen Access
Multicomponent Internal Recalibration of an LC−FTICR-MS Analysis Employing a Partially Characterized Complex Peptide Mixture:  Systematic and Random Errors
Analytical Chemistry·2005· 24 cited
Increasing peptide identification in tandem mass spectrometry through automatic function switching optimization
Journal of the American Society for Mass Spectrometry·2005· 4 cited
Determination of the systematic and random measurement error in an LC-FTICR mass spectrometry analysis of a partially characterized complex peptide mixture
2005· 1 cited
Surface analysis of peptide mass spectra to improve time and mass localization
2005· 3 cited
A novel approach to speed up peptide sequencing via MS/MS spectra analysis
2005
Development of a robust software-based method for noise filtering in time-of-flight mass spectra
Molecular & Cellular Proteomics·2003

Frequent Co-authors

Robert E. Kearney(11), Corey Yanofsky(10), Daniel Boismenu(7), Alexander W. Bell(5), Kossi Lekpor(4), John Bergeron(3), Souad Lesimple(3), Christian E. H. Beaudrie(2), Sylvie LaBoissière(2), Robert Nadon(2), Greg T. Blakney(2), A.W. Bell(2), F. Morales(2), Jian Liu(1), Frank Morales(1), TuKiet T. Lam(1), Alan G. Marshall(1), Tu Kiet T. Lam(1), A.G. Marshall(1), K. Lekpor(1)