Elie N. Farah

University of California, San Diego — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

12h-index1.2kcitations27works24.32yr avg
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Research Topics

RNA and protein synthesis mechanisms(8), RNA Research and Splicing(8), Congenital heart defects research(8), Single-cell and spatial transcriptomics(6), RNA modifications and cancer(6)

Publications27 total

MERFISH+, a large-scale, multi-omics spatial technology resolves the molecular holograms of the 3D human developing heart
2025· 2 citedOpen Access
Charting the cardiac landscape: Advances in spatial transcriptomics for heart biology
Seminars in Cell and Developmental Biology·2025· 1 citedOpen Access
Single cell multiomics reveals drivers of metabolic dysfunction-associated steatohepatitis
2025· 2 citedOpen Access
Single cell multiomics and 3D genome architecture reveal novel pathways of human heart failure
2025· 1 citedOpen Access
CXCL12 drives natural variation in coronary artery anatomy across diverse populations
Cell·2025· 6 citedOpen Access
Single-cell multi-modal integrative analyses highlight functional dynamic gene regulatory networks directing human cardiac development
Cell Genomics·2024· 12 citedOpen Access
Spatially organized cellular communities form the developing human heart
Nature·2024· 146 citedOpen Access
<i>CXCL12</i> drives natural variation in coronary artery anatomy across diverse populations
2023· 2 citedOpen Access
Author Correction: Human-gained heart enhancers are associated with species-specific cardiac attributes
Nature Cardiovascular Research·2022· 1 citedOpen Access
Human-gained heart enhancers are associated with species-specific cardiac attributes
Nature Cardiovascular Research·2022· 12 citedOpen Access
Cell Layers: uncovering clustering structure in unsupervised single-cell transcriptomic analysis
Bioinformatics Advances·2022· 2 citedOpen Access
Retroperitoneal Laparoscopic Nephrectomy
2022
Cardiac cell type–specific gene regulatory programs and disease risk association
Science Advances·2021· 134 citedOpen Access
Cell Layers: Uncovering clustering structure and knowledge in unsupervised single-cell transcriptomic analysis
2020Open Access
Cardiac Cell Type-Specific Gene Regulatory Programs and Disease Risk Association
2020· 5 citedOpen Access
Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells
Nature Genetics·2019· 395 cited
Canonical Wnt5b Signaling Directs Outlying Nkx2.5+ Mesoderm into Pacemaker Cardiomyocytes
Developmental Cell·2019· 93 citedOpen Access
Combinatorial interactions of genetic variants in human cardiomyopathy
Nature Biomedical Engineering·2019· 47 citedOpen Access
3D Chromatin Architecture Remodeling during Human Cardiomyocyte Differentiation Reveals A Role Of HERV-H In Demarcating Chromatin Domains
2018· 11 citedOpen Access
mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances
Nature Communications·2018· 98 citedOpen Access
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Frequent Co-authors

C. Neil(19), Bing Ren(8), Eugin Destici(7), Yanxiao Zhang(6), Sebastian Preißl(6), Sylvia Μ. Evans(6), Dmitri N. Ermolenko(6), Jonathan D. Grinstein(5), Shaina Tran(5), Enea Salsi(5), Ah Young Lee(4), Quan Zhu(4), Robert Hu(4), Qingquan Zhang(4), Olivier Poirion(4), Fugui Zhu(4), Allen Wang(4), Kyle J. Gaulton(4), Joshua Bloomekatz(4), Ting Li(3)