A. Birer

Inserm — France

Engineering · Physical Sciences

15h-index677citations60works4.52yr avg
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Research Topics

Ultrasound and Hyperthermia Applications(18), Antibiotic Resistance in Bacteria(13), Ultrasound Imaging and Elastography(10), Bacterial Identification and Susceptibility Testing(7), Kidney Stones and Urolithiasis Treatments(6)

Publications60 total

Emergence and Polyclonal Dissemination of <i>bla</i><sub>NDM-7</sub>–Carrying InX3 Plasmid in <i>Enterobacter cloacae</i> Complex, France, 2021–2023
Emerging infectious diseases·2025Open Access
Characterization of Carbapenemase-producing Enterobacterales isolated from patients returning from Sub-Saharan Africa, France, 2015–2022
Journal of Antimicrobial Chemotherapy·2025· 1 cited
Vat-Mediated Mucus Penetration Enables Genotoxic Activity of pks+ Escherichia coli
International Journal of Molecular Sciences·2025· 1 citedOpen Access
ChiA: a major player in the virulence of Crohn’s disease-associated adherent and invasive <i>Escherichia coli</i> (AIEC)
Gut Microbes·2024· 8 citedOpen Access
Oxacillinase-484–Producing Enterobacterales, France, 2018–2023
Emerging infectious diseases·2024· 3 citedOpen Access
IMI-Type Carbapenemase-Producing <i>Enterobacter cloacae</i> Complex, France and Overseas Regions, 2012–2022
Emerging infectious diseases·2024· 14 citedOpen Access
The emergence of carbapenemase-producing Enterobacterales in hospitals: a major challenge for a debilitated healthcare system in Lebanon
Frontiers in Public Health·2023· 9 citedOpen Access
Emergence and rapid dissemination of highly resistant NDM-14-producing Klebsiella pneumoniae ST147, France, 2022
Eurosurveillance·2023· 24 citedOpen Access
Nationwide molecular epidemiology of carbapenemase-producing <i>Citrobacter</i> spp. in France in 2019 and 2020
mSphere·2023· 19 citedOpen Access
Antihyperalgesic properties of gut microbiota: Parabacteroides distasonis as a new probiotic strategy to alleviate chronic abdominal pain
Pain·2023· 15 cited
ABRomics: an integrated multi-omics platform for antibiotic resistance research and public health
HAL (Le Centre pour la Communication Scientifique Directe)·2023Open Access
ABRomics metadata referential for genomic data
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Population Analysis of <i>Escherichia coli</i> Sequence Type 361 and Reduced Cefiderocol Susceptibility, France
Emerging infectious diseases·2023· 15 citedOpen Access
ABRomics - an open access online platform on antimicrobial resistance to store, integrate, analyze and share multi-omics data
HAL (Le Centre pour la Communication Scientifique Directe)·2023Open Access
Multidrug-resistant Enterobacterales responsible for septicaemia in a neonatal intensive care unit in Morocco
Journal of Global Antimicrobial Resistance·2023· 24 citedOpen Access
Web-based prediction of antimicrobial resistance in enterococcal clinical isolates by whole-genome sequencing
European Journal of Clinical Microbiology & Infectious Diseases·2022· 6 cited
Investigation of a vanA linezolid- and vancomycin-resistant Enterococcus faecium outbreak in the Southwest Indian Ocean (Reunion Island)
International Journal of Antimicrobial Agents·2022· 9 citedOpen Access
Polyclonal Dissemination of OXA-232 Carbapenemase–Producing <i>Klebsiella pneumoniae</i>, France, 2013–2021
Emerging infectious diseases·2022· 16 citedOpen Access
ABRomics - a digital platform on antimicrobial resistance to store, integrate, analyze and share multi-omics data
HAL (Le Centre pour la Communication Scientifique Directe)·2022Open Access
Anti-TNF Agents Restrict Adherent-invasive <i>Escherichia coli</i> Replication Within Macrophages Through Modulation of Chitinase 3-like 1 in Patients with Crohn’s Disease
Journal of Crohn s and Colitis·2022· 15 cited
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Frequent Co-authors

D. Cathignol(10), Thierry Naas(9), Cyril Lafon(9), Delphine Girlich(8), Agnès B. Jousset(8), Laurent Dortet(8), Jean Yves Chapelon(7), Cécile Emeraud(7), Rémy A. Bonnin(7), F. Chavrier(6), J.-P. Sferruzza(6), Guillaume Bouchoux(5), Rémi Souchon(4), Jean‐Yves Chapelon(4), Richard Bonnet(4), D. Cathignol(4), N.R. Owen(4), R. Berriet(4), G. Fleury(4), Nicolas Barnich(4)