Alina Isakova

Stanford University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

15h-index2.0kcitations37works1.72yr avg
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Research Topics

RNA Research and Splicing(11), Genomics and Chromatin Dynamics(7), Cancer-related molecular mechanisms research(7), Single-cell and spatial transcriptomics(7), RNA modifications and cancer(6)

Publications35 total

Cellular Aging Signatures in the Plasma Proteome Record Human Health and Disease
2026Open Access
Cell-Type Resolved Protein Atlas of Brain Lysosomes Identifies SLC45A1-Associated Disease as a Lysosomal Disorder
Zenodo (CERN European Organization for Nuclear Research)·2026Open Access
Cell-Type Resolved Protein Atlas of Brain Lysosomes Identifies SLC45A1-Associated Disease as a Lysosomal Disorder
Zenodo (CERN European Organization for Nuclear Research)·2026Open Access
Divergent trajectories of brain ageing across the seventh decade predict AD pathology in a UK population‐based birth cohort
Alzheimer s & Dementia·2025Open Access
Spatial and single-cell transcriptomics reveal the reorganization of cerebellar microglia with aging
Cell Reports·2025· 1 citedOpen Access
Scalable single-cell total RNA-seq reveals non-coding programs in immunity, infection, and brain development
2025· 1 citedOpen Access
Beyond polyA: scalable single-cell total RNA-seq unifies coding and non-coding transcriptomics
2025Open Access
CellVoyager: AI CompBio Agent Generates New Insights by Autonomously Analyzing Biological Data
2025· 9 citedOpen Access
Spatial and molecular insights into microglial roles in cerebellar aging
2025· 3 citedOpen Access
Connectome-seq: High-throughput Mapping of Neuronal Connectivity at Single-Synapse Resolution via Barcode Sequencing
2025· 1 citedOpen Access
Characterizing expression changes in noncoding RNAs during aging and heterochronic parabiosis across mouse tissues
Nature Biotechnology·2023· 52 citedOpen Access
Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy
Nature Communications·2022· 7 citedOpen Access
Single-Cell Transcriptomic Atlas of the Human Endometrium During the Menstrual Cycle
Obstetrical & Gynecological Survey·2022· 20 cited
Single-cell quantification of a broad RNA spectrum reveals unique noncoding patterns associated with cell types and states
Proceedings of the National Academy of Sciences·2021· 95 citedOpen Access
Deconvoluting complex correlates of COVID19 severity with local ancestry inference and viral phylodynamics: Results of a multiomic pandemic tracking strategy
2021· 1 citedOpen Access
A mouse tissue atlas of small noncoding RNA
Proceedings of the National Academy of Sciences·2020· 104 citedOpen Access
Single-cell transcriptomic atlas of the human endometrium during the menstrual cycle
Nature Medicine·2020· 604 citedOpen Access
Single cell profiling of total RNA using Smart-seq-total
2020· 21 citedOpen Access
miRSwitch: detecting microRNA arm shift and switch events
Nucleic Acids Research·2020· 30 citedOpen Access
miRSwitch: Detecting microRNA arm shift and switch events
2020Open Access
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Frequent Co-authors

Stephen R. Quake(12), Bart Deplancke(8), Norma Neff(7), Tobias Fehlmann(5), Andreas Keller(5), Amelia Farinas(4), Jing Ren(3), Drew Friedmann(3), Jiawei Zeng(3), Sophie M. Grutzner(3), Albert Pun(3), Grace Zhao(3), Sai Saroja Kolluru(3), Ruiyu Wang(3), Rui Lin(3), Pengcheng Li(3), Anan Li(3), Jennifer L Raymond(3), Qingming Luo(3), Minmin Luo(3)