Yniv Palti

National Center for Cool and Cold Water Aquaculture — United States

Immunology and Microbiology · Life Sciences

50h-index8.0kcitations164works4.62yr avg
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Research Topics

Aquaculture disease management and microbiota(75), Genetic and phenotypic traits in livestock(67), Aquaculture Nutrition and Growth(34), Genetic diversity and population structure(33), Genetic Mapping and Diversity in Plants and Animals(32)

Publications164 total

<i>De novo</i> Genome Assemblies of Four Rainbow Trout Genetic Lines Reveal Structural Variants In Pursuit of a Pangenome Reference
2025Open Access
public mid-density genotyping platform for North American Atlantic salmon (Salmo salar L.)
Genetic Resources·2025Open Access
Genome-wide association analysis of resistance to bacterial cold-water disease in an important rainbow trout aquaculture breeding population
Frontiers in Genetics·2025Open Access
The genome assembly of the westslope cutthroat trout, <i>Oncorhynchus lewisi</i>, reveals interspecific chromosomal rearrangements with the rainbow trout, <i>Oncorhynchus mykiss</i>
G3 Genes Genomes Genetics·2025· 2 citedOpen Access
Correction: Advancing genetic improvement in the omics era: status and priorities for United States aquaculture
BMC Genomics·2025Open Access
Chromosome level genome assembly and annotation of the Swanson rainbow trout homozygous line
Scientific Data·2025· 1 citedOpen Access
Advancing genetic improvement in the omics era: status and priorities for United States aquaculture
BMC Genomics·2025· 13 citedOpen Access
Transcriptomic Response of the Ovarian Follicle Complex in Post-Vitellogenic Rainbow Trout to 17α,20β-Dihdroxy-4-pregnen-3-one In Vitro
International Journal of Molecular Sciences·2024· 4 citedOpen Access
The genome assembly of the westslope cutthroat trout, <i>Oncorhynchus lewisi</i> , reveals interspecific chromosomal rearrangements with the rainbow trout
2024· 1 citedOpen Access
Accurate genotype imputation from low-coverage whole-genome sequencing data of rainbow trout
G3 Genes Genomes Genetics·2024· 14 citedOpen Access
Genome-wide association analysis of the resistance to infectious hematopoietic necrosis virus in two rainbow trout aquaculture lines confirms oligogenic architecture with several moderate effect quantitative trait loci
Frontiers in Genetics·2024· 9 citedOpen Access
Genetic architecture and accuracy of predicted genomic breeding values for sea lice resistance in the St John River aquaculture strain of North American Atlantic salmon
Aquaculture·2024· 11 cited
Definition of a consistent and standardized IMGT-based nomenclature of salmonid IG and TR loci: from genomics to comparative immune repertoire analysis
Developmental & Comparative Immunology·2023
The generation of the first chromosome-level de novo genome assembly and the development and validation of a 50K SNP array for the St. John River aquaculture strain of North American Atlantic salmon
G3 Genes Genomes Genetics·2023· 22 citedOpen Access
Effects of fertilizing eggs from a summer-spawning line with cryopreserved milt from a winter-spawning line on spawning date and egg production traits in rainbow trout
Aquaculture Reports·2023· 3 citedOpen Access
Genomic selection models substantially improve the accuracy of genetic merit predictions for fillet yield and body weight in rainbow trout using a multi-trait model and multi-generation progeny testing
Genetics Selection Evolution·2023· 13 citedOpen Access
The generation of the first chromosome-level de-novo genome assembly and the development and validation of a 50K SNP array for North American Atlantic salmon
2022· 4 citedOpen Access
Development of a High-Density 665 K SNP Array for Rainbow Trout Genome-Wide Genotyping
Frontiers in Genetics·2022· 30 citedOpen Access
Genome-wide mapping of quantitative trait loci that can be used in marker-assisted selection for resistance to bacterial cold water disease in two commercial rainbow trout breeding populations
Aquaculture·2022· 13 cited
Identification of Haplotypes Associated With Resistance to Bacterial Cold Water Disease in Rainbow Trout Using Whole-Genome Resequencing
Frontiers in Genetics·2022· 14 citedOpen Access
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Frequent Co-authors

Caird E. Rexroad(22), Guangtu Gao(21), Roger L. Vallejo(20), Gregory D. Wiens(16), Sixin Liu(12), Timothy D. Leeds(12), Gary H. Thorgaard(11), James E. Parsons(7), Jason P. Evenhuis(7), Jeffrey T. Silverstein(6), Mohamed Salem(6), Timothy J. Welch(6), Sigbjørn Lien(5), Thomas Moen(5), Michael R. Miller(5), Álvaro González Hernández(5), Kyle E. Martin(5), Eric M. Hallerman(5), Matthew Kent(4), Torfinn Nome(4)