Jan Beránek

University of Chemistry and Technology, Prague — Czech Republic

Physics and Astronomy · Physical Sciences

4h-index42citations15works4.82yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

Spectroscopy and Quantum Chemical Studies(5), Protein Structure and Dynamics(4), Advanced Chemical Physics Studies(3), Phase Equilibria and Thermodynamics(3), RNA and protein synthesis mechanisms(3)

Publications15 total

CACHE Challenge #1: Targeting the WDR Domain of LRRK2, A Parkinson’s Disease Associated Protein
UNC Libraries·2025Open Access
High-yield production and functional analysis of novel rhizobial-type glutaminase-free l-asparaginase from Paenibacillus thiaminolyticus
Folia Microbiologica·2025Open Access
CACHE Challenge #1: Targeting the WDR Domain of LRRK2, A Parkinson’s Disease Associated Protein
Journal of Chemical Information and Modeling·2024· 23 citedOpen Access
Analysis of metadynamics simulations by metadynminer.py
Bioinformatics·2024· 1 citedOpen Access
CACHE Challenge #1: targeting the WDR domain of LRRK2, a Parkinson’s Disease associated protein
2024· 5 citedOpen Access
Uncertainties of predictions from temperature replica exchange simulations
The Journal of Chemical Physics·2024· 1 citedOpen Access
Synthesis and unexpected binding of monofluorinated N,Nʹ-diacetylchitobiose and LacdiNAc to wheat germ agglutinin
Bioorganic Chemistry·2024· 2 cited
Acceleration of Molecular Simulations by Parametric Time-Lagged tSNE Metadynamics
The Journal of Physical Chemistry B·2024· 6 citedOpen Access
Acceleration of Molecular Simulations by Parametric Time-Lagged tSNE Metadynamics
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Acceleration of Molecular Simulations by Parametric Time-Lagged tSNE Metadynamics - 2
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Free Energy Differences from Molecular Simulations: Exact Confidence Intervals from Transition Counts
Journal of Chemical Theory and Computation·2023· 4 citedOpen Access
Free Energy Differences from Molecular Simulations: Exact Confidence Intervals from Transition Counts
2022Open Access
Free Energy Differences from Molecular Simulations: Exact Confidence Intervals from Transition Counts
Zenodo (CERN European Organization for Nuclear Research)·2022Open Access
Free Energy Differences from Molecular Simulations: Exact Confidence Intervals from Transition Counts
2022Open Access
Free Energy Differences from Molecular Simulations: Exact Confidence Intervals from Transition Counts
Zenodo (CERN European Organization for Nuclear Research)·2022Open Access

Frequent Co-authors

Vojtěch Spiwok(14), Pavel Kříž(6), Aleš Křenek(4), Fengling Li(3), Suzanne Ackloo(3), C.H. Arrowsmith(3), Fuqiang Ban(3), Christopher Barden(3), Hartmut Beck(3), Francois Berenger(3), Albina Bolotokova(3), Guillaume Bret(3), Marko Breznik(3), Emanuele Carosati(3), Irene Chau(3), Yu Chen(3), Artem Cherkasov(3), Dennis Della Corte(3), Katrin Denzinger(3), A. Dong(3)