Karel Svoboda

Allen Institute — United States

Neuroscience · Life Sciences

132h-index82.1kcitations404works9.42yr avg
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Research Topics

Neural dynamics and brain function(186), Neuroscience and Neuropharmacology Research(121), Photoreceptor and optogenetics research(91), Neuroscience and Neural Engineering(81), Advanced Fluorescence Microscopy Techniques(66)

Publications401 total

Efficient and reproducible pipelines for spike sorting large-scale electrophysiology data
2026Open Access
Efficient and reproducible pipelines for spike sorting large-scale electrophysiology data
2026Open Access
Glutamate indicators with increased sensitivity and tailored deactivation rates
Nature Methods·2025· 4 citedOpen Access
Neural dynamics outside task-coding dimensions drive decision trajectories through transient amplification
2025· 1 citedOpen Access
Connectivity underlying motor cortex activity during goal-directed behaviour
Nature·2025· 1 cited
Brain-wide analysis reveals movement encoding structured across and within brain areas
Nature Neuroscience·2025· 2 citedOpen Access
Efficient and reproducible pipelines for spike sorting large-scale electrophysiology data
2025· 1 citedOpen Access
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species
2025· 1 citedOpen Access
Enhancer-AAVs allow genetic access to oligodendrocytes and diverse populations of astrocytes across species
2025Open Access
Exploring the correspondence between gene expression and thalamic nuclei using the THALMANAC resource
2025Open Access
Brain-wide representations of prior information in mouse decision-making
Nature·2025· 29 citedOpen Access
Light-Sheet Microscopy Pipelines for Mammalian Brain Connectivity Mapping Across Spatial Scales
Microscopy and Microanalysis·2025· 2 citedOpen Access
Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues
eLife·2025· 4 citedOpen Access
Author response: Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues
2025Open Access
A common computational and neural anomaly across mouse models of autism
Nature Neuroscience·2025· 4 citedOpen Access
Author response: Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues
2025Open Access
Expansion-assisted selective plane illumination microscopy for nanoscale imaging of centimeter-scale tissues
2025· 6 citedOpen Access
Author response: Reproducibility of in vivo electrophysiological measurements in mice
2025Open Access
Reproducibility of in vivo electrophysiological measurements in mice
eLife·2025· 5 citedOpen Access
Spike inference from calcium imaging data acquired with GCaMP8 indicators
2025Open Access
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Frequent Co-authors

Loren L. Looger(9), Daniel Huber(9), Eric R. Schreiter(6), Vivek Jayaraman(5), Douglas S. Kim(5), Leopoldo Petreanu(5), Anthony Holtmaat(5), Graham Knott(5), Tsai‐Wen Chen(4), Diego A. Gutnisky(4), Tianyi Mao(4), Steven M. Block(4), Linda Wilbrecht(4), Zengcai V. Guo(4), Nuo Li(4), Yi Sun(3), Lin Tian(3), Cornelia I. Bargmann(3), Joshua T. Trachtenberg(3), Egbert Welker(3)