Nils Homer

Fulcrum Therapeutics (United States) — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

21h-index129.1kcitations34works2.52yr avg
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Research Topics

Genomics and Phylogenetic Studies(13), Genetic Associations and Epidemiology(7), Chromosomal and Genetic Variations(5), Gene expression and cancer classification(5), RNA and protein synthesis mechanisms(4)

Publications29 total

Evaluation of ensilication technology for ambient DNA preservation
2025Open Access
Large Serine Integrase Off-target Discovery and Validation for Therapeutic Genome Editing
2024· 5 citedOpen Access
Fast and accurate kinship estimation using sparse SNPs in relatively large database searches
Forensic Science International Genetics·2022· 43 cited
Fast and Accurate Kinship Estimation Using Sparse SNPs in Relatively Large Database Searches
2022· 8 citedOpen Access
Next Generation Genotyping (NGG) Using Riptide™. Performance Specifications when Best Practices are Applied
PubMed Central·2020· 1 citedOpen Access
CRISPR-Mediated Depletion of Ribosomal RNA-Derived DNA from RNA-Seq NGS Libraries
PubMed Central·2020Open Access
RipTide High Throughput NGS Library Prep for Genotyping in Populations
PubMed Central·2019· 2 citedOpen Access
RipTide Ultra High-Throughput Rapid DNA Library Preparation for Next Generation Sequencing
PubMed Central·2019· 2 citedOpen Access
Correction: U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line
PLoS Genetics·2018· 21 citedOpen Access
An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
Genome biology·2014· 432 citedOpen Access
This Provisional PDF corresponds to the article as it appeared upon acceptance. Copyedited and fully formatted PDF and full text (HTML) versions will be made available soon. An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge
2014
An integrated semiconductor device enabling non-optical genome sequencing
Nature·2011· 2.1k citedOpen Access
Improved variant discovery through local re-alignment of short-read next-generation sequencing data using SRMA
Genome biology·2010· 71 citedOpen Access
Local alignment of generalized k-base encoded DNA sequence
BMC Bioinformatics·2010· 1 citedOpen Access
U87MG Decoded: The Genomic Sequence of a Cytogenetically Aberrant Human Cancer Cell Line
PLoS Genetics·2010· 288 citedOpen Access
Computational challenges in genomic analysis for the discovery of the genetic basis of human disease
2010
Improving the efficiency of genomic loci capture using oligonucleotide arrays for high throughput resequencing
BMC Genomics·2009· 37 citedOpen Access
BFAST: An Alignment Tool for Large Scale Genome Resequencing
PLoS ONE·2009· 534 citedOpen Access
Local alignment of two-base encoded DNA sequence
BMC Bioinformatics·2009· 40 citedOpen Access
The Sequence Alignment/Map format and SAMtools
Bioinformatics·2009· 64.7k citedOpen Access
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Frequent Co-authors

David W. Craig(8), Barry Merriman(8), Stanley F. Nelson(8), John V. Pearson(6), Szabolcs Szelinger(5), Waibhav Tembe(5), Dietrich A. Stephan(5), Tim Fennell(4), Matthew J. Huentelman(4), Gaia Suckow(4), Phillip Ordoukhanian(4), Margot Redman(3), Brian D. O’Connor(3), Zugen Chen(3), Hane Lee(3), Steve R. Head(3), Keith Brown(3), Azeem Siddique(3), Robert E. Handsaker(2), Catherine A. Brownstein(2)