Bo Yu

National Institutes of Health — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

12h-index19.2kcitations23works136.62yr avg
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Research Topics

Biomedical Text Mining and Ontologies(13), Computational Drug Discovery Methods(11), Metabolomics and Mass Spectrometry Studies(6), Semantic Web and Ontologies(5), Lanthanide and Transition Metal Complexes(3)

Publications22 total

A resource description framework (RDF) model of named entity co-occurrences in biomedical literature and its integration with PubChemRDF
Journal of Cheminformatics·2025· 1 citedOpen Access
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences in Biomedical Literature and Its Integration with PubChemRDF
Zenodo (CERN European Organization for Nuclear Research)·2025· 1 citedOpen Access
PubChem 2025 update
Nucleic Acids Research·2024· 666 citedOpen Access
PubChem synonym filtering process using crowdsourcing
Journal of Cheminformatics·2024· 3 citedOpen Access
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences in Biomedical Literature and Its Integration with PubChemRDF
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
PubChem 2023 update
Nucleic Acids Research·2022· 2.9k citedOpen Access
Discovering and Summarizing Relationships Between Chemicals, Genes, Proteins, and Diseases in PubChem
Frontiers in Research Metrics and Analytics·2021· 34 citedOpen Access
PubChem in 2021: new data content and improved web interfaces
Nucleic Acids Research·2020· 3.8k citedOpen Access
PubChem 2019 update: improved access to chemical data
Nucleic Acids Research·2018· 3.3k citedOpen Access
An update on PUG-REST: RESTful interface for programmatic access to PubChem
Nucleic Acids Research·2018· 137 citedOpen Access
CDD/SPARCLE: functional classification of proteins via subfamily domain architectures
Nucleic Acids Research·2016· 2.8k citedOpen Access
Literature information in PubChem: associations between PubChem records and scientific articles
Journal of Cheminformatics·2016· 91 citedOpen Access
PubChem Substance and Compound databases
Nucleic Acids Research·2015· 5.3k citedOpen Access
PubChem structure–activity relationship (SAR) clusters
Journal of Cheminformatics·2015· 31 citedOpen Access
Scene Perception in IoE era
2015· 1 cited
Additional file 2: of PubChem structure–activity relationship (SAR) clusters
Figshare·2015Open Access
Additional file 1: of PubChem structure–activity relationship (SAR) clusters
Figshare·2015Open Access
Additional file 3: of PubChem structure–activity relationship (SAR) clusters
Figshare·2015Open Access
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Frequent Co-authors

Sunghwan Kim(19), Evan Bolton(19), Tiejun Cheng(12), Qingliang Li(11), Leonid Zaslavsky(10), Paul Thiessen(9), Stephen H. Bryant(8), Lianyi Han(7), Siqian He(7), Jie Chen(6), Asta Gindulytė(6), Benjamin A. Shoemaker(6), Jian Zhang(6), Jia He(4), Volker Hähnke(4), Jane He(2), Jiyao Wang(2), Gang Fu(1), Aron Marchler‐Bauer(1), Christopher J. Lanczycki(1)