Adrien S. J. Melquiond

Utrecht University — Netherlands

Biochemistry, Genetics and Molecular Biology · Life Sciences

24h-index5.2kcitations44works389.02yr avg
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Research Topics

Protein Structure and Dynamics(24), Computational Drug Discovery Methods(9), Enzyme Structure and Function(9), RNA and protein synthesis mechanisms(6), Bioinformatics and Genomic Networks(6)

Publications44 total

The HADDOCK2.4 web server for integrative modeling of biomolecular complexes
Nature Protocols·2024· 389 cited
BioExcel Whitepaper on Scientific Software Development
Zenodo (CERN European Organization for Nuclear Research)·2022· 1 citedOpen Access
Robust detection of translocations in lymphoma FFPE samples using targeted locus capture-based sequencing
Nature Communications·2021· 43 citedOpen Access
An overview of data‐driven HADDOCK strategies in CAPRI rounds 38‐45
Proteins Structure Function and Bioinformatics·2019· 17 citedOpen Access
Blind prediction of homo‐ and hetero‐protein complexes: The CASP13‐CAPRI experiment
Proteins Structure Function and Bioinformatics·2019· 138 citedOpen Access
An overview of data-driven HADDOCK strategies in CAPRI rounds 38-45
2019· 4 citedOpen Access
Bioexcel Whitepaper On Scientific Software Development
Zenodo (CERN European Organization for Nuclear Research)·2018· 6 citedOpen Access
HADDOCK
2018· 1 cited
Bioexcel Deliverable 2.3 - User Feedback And Future Roadmap
Zenodo (CERN European Organization for Nuclear Research)·2017Open Access
Performance of HADDOCK and a simple contact-based protein–ligand binding affinity predictor in the D3R Grand Challenge 2
Journal of Computer-Aided Molecular Design·2017· 138 citedOpen Access
Sense and Simplicity in HADDOCK Scoring: Lessons from CASP‐CAPRI (page 418)
Proteins Structure Function and Bioinformatics·2017· 35 citedOpen Access
Building biomolecular modelling communities through BioExcel Interest Groups
Faculty of 1000 Research Ltd·2017Open Access
Bioexcel Deliverable 2.2 – First Release Of Workflow Blocks And Portals
Zenodo (CERN European Organization for Nuclear Research)·2016Open Access
Sense and simplicity in <scp>HADDOCK</scp> scoring: Lessons from <scp>CASP‐CAPRI</scp> round 1
Proteins Structure Function and Bioinformatics·2016· 62 citedOpen Access
dMM-PBSA: A New HADDOCK Scoring Function for Protein-Peptide Docking
Frontiers in Molecular Biosciences·2016· 90 citedOpen Access
Enhancers reside in a unique epigenetic environment during early zebrafish development
Genome biology·2016· 51 citedOpen Access
Prediction of homoprotein and heteroprotein complexes by protein docking and template‐based modeling: A CASP‐CAPRI experiment
Proteins Structure Function and Bioinformatics·2016· 163 citedOpen Access
Molecular dynamics characterization of the conformational landscape of small peptides: A series of hands‐on collaborative practical sessions for undergraduate students
Biochemistry and Molecular Biology Education·2016· 10 citedOpen Access
Integrative modelling goes HPC/HTC
Faculty of 1000 Research Ltd·2016Open Access
Additional file 2: of Enhancers reside in a unique epigenetic environment during early zebrafish development
Figshare·2016Open Access
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Frequent Co-authors

Alexandre M. J. J. Bonvin(30), Mikaël Trellet(18), Panagiotis L. Kastritis(14), Ezgi Karaca(14), João Rodrigues(13), Gydo C. P. van Zundert(8), Marc van Dijk(8), Li C. Xue(8), Jörg Schaarschmidt(7), Anna Vangone(7), Zeynep Kurkcuoglu(7), Cunliang Geng(7), Sjoerd J. de Vries(6), Panagiotis I. Koukos(6), Jorge Roel‐Touris(6), Christophe Schmitz(4), Normand Mousseau(4), Philippe Derreumaux(4), Lucas Kaaij(4), Michal Mokrý(4)