Renmin Han

Qingdao University — China

Biochemistry, Genetics and Molecular Biology · Life Sciences

17h-index1.1kcitations79works3.92yr avg
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Research Topics

Advanced Electron Microscopy Techniques and Applications(33), Electron and X-Ray Spectroscopy Techniques(24), Genomics and Phylogenetic Studies(19), Machine Learning in Bioinformatics(11), Cell Image Analysis Techniques(10)

Publications79 total

Adaptive Gaussian representation for differentiable cryo-electron tomography reconstruction
Journal of Structural Biology·2025
ptmK: A computationally efficient toolkit for high-throughput lysine PTM modeling in proteins
Biophysical Journal·2025Open Access
ADMGCN: graph convolutional network for Alzheimer’s disease diagnosis with a meta-learning paradigm
Bioinformatics·2025Open Access
CryoAlign2: efficient global and local Cryo-EM map retrieval based on parallel-accelerated local spatial structural features
Bioinformatics·2025Open Access
A noise-robust classification method for cryo-ET subtomograms with out-of-distribution detection
Bioinformatics·2025· 1 citedOpen Access
Robust projection parameter calibration in cryo-ET with <mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" altimg="si182.svg" display="inline" id="d1e2067"> <mml:msub> <mml:mrow> <mml:mi>L</mml:mi> </mml:mrow> <mml:mrow> <mml:mn>1</mml:mn> </mml:mrow> </mml:msub> </mml:math> -norm optimization
Ultramicroscopy·2025
A Gaussian Filter-Based 3D Registration Method for Series Section Electron Microscopy
Proceedings of the AAAI Conference on Artificial Intelligence·2025· 1 citedOpen Access
TiltRec: an ultra-fast and open-source toolkit for cryo-electron tomographic reconstruction
Bioinformatics·2025Open Access
Automatic segmentation of the midfacial bone surface from ultrasound images using deep learning methods
International Journal of Oral and Maxillofacial Surgery·2025· 1 cited
Ptmk: A Lightweight Toolkit for High-Throughput Generation and Evaluation of Lysine Modifications in Protein Structures
SSRN Electronic Journal·2025Open Access
Few-shot classification of Cryo-ET subvolumes with deep Brownian distance covariance
Briefings in Bioinformatics·2024· 1 citedOpen Access
UPicker: a semi-supervised particle picking transformer method for cryo-EM micrographs
Briefings in Bioinformatics·2024· 2 citedOpen Access
TDFPS-Designer: an efficient toolkit for barcode design and selection in nanopore sequencing
Genome biology·2024Open Access
WITHDRAWN: Serial section microscopy image inpainting guided by axial optical flow
Pattern Recognition·2024Open Access
Serial Section Microscopy Image Inpainting Guided by Axial Optical Flow
2024
Accurate Prediction of Protein Structural Flexibility by Deep Learning Integrating Intricate Atomic Structures and Cryo-EM Density Information
Nature Communications·2024· 65 citedOpen Access
Markerauto2: A fast and robust fully automatic fiducial marker-based tilt series alignment software for electron tomography
Structure·2024· 5 citedOpen Access
GFPack++: Improving 2D Irregular Packing by Learning Gradient Field with Attention
arXiv (Cornell University)·2024Open Access
Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining
Journal of Computational Biology·2024· 1 cited
Generating barcodes for nanopore sequencing data with PRO
Fundamental Research·2024· 2 citedOpen Access
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Frequent Co-authors

Fa Zhang(33), Xin Gao(17), Xiaogang Li(11), Fei Sun(7), Xiaohua Wan(7), Chenjie Feng(6), Jianyi Yang(6), Sheng Wang(6), Guojun Li(6), Hongjia Li(5), Zhidong Yang(5), Wenkai Wang(4), Zhenling Peng(4), Yu Li(4), Fan Xu(4), Mingshu Zhang(4), Ting Yu(4), Zongyang Du(3), Hong Wei(3), Mo Li(3)