Yuanzhe Shao

Peking University — China

Biochemistry, Genetics and Molecular Biology · Life Sciences

5h-index74citations16works2.82yr avg
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Research Topics

Genomics and Phylogenetic Studies(12), Bacterial Genetics and Biotechnology(11), Microbial Natural Products and Biosynthesis(5), Microbial Community Ecology and Physiology(5), Bacterial biofilms and quorum sensing(3)

Publications16 total

A Genome-Based Pipeline for Digital Siderophore Typing in <i>Pseudomonas</i> Iron-Interaction Network
2025Open Access
Siderophore synthetase-receptor gene coevolution reveals habitat- and pathogen-specific bacterial iron interaction networks
Universität Zürich, ZORA·2025Open Access
Siderophore synthetase-receptor gene coevolution reveals habitat- and pathogen-specific bacterial iron interaction networks
Science Advances·2025· 11 citedOpen Access
Forging the iron‐net: Towards a quantitative understanding of microbial communities via siderophore‐mediated interactions
Quantitative Biology·2025· 7 citedOpen Access
Author response: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
2024Open Access
Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
eLife·2024Open Access
Author response: From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
2024Open Access
From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
2024Open Access
Forging the Iron-Net: Towards a Quantitative Understanding of Microbial Communities via Siderophore-Mediated Interactions
Preprints.org·2024· 1 citedOpen Access
From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
2024· 1 citedOpen Access
Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
eLife·2024· 13 citedOpen Access
Reviewer #3 (Public Review): From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
2024Open Access
Siderophore synthetase-receptor gene coevolution reveals habitat- and pathogen-specific bacterial iron interaction networks
2023· 8 citedOpen Access
From sequence to molecules: Feature sequence-based genome mining uncovers the hidden diversity of bacterial siderophore pathways
2023· 2 citedOpen Access
Knowledge-guided data mining on the standardized architecture of NRPS: Subtypes, novel motifs, and sequence entanglements
PLoS Computational Biology·2023· 29 citedOpen Access
Knowledge-guided data mining on the standardized architecture of NRPS: subtypes, novel motifs, and sequence entanglements
2022· 2 citedOpen Access

Frequent Co-authors

Ruolin He(15), Zhiyuan Li(15), Shaohua Gu(14), Di Zhang(12), Jiqi Shao(12), Alexandre Jousset(11), Ruichen Xu(10), Ville‐Petri Friman(10), Zhong Wei(10), Rolf Kümmerli(9), Karoline Rehm(8), Laurent Bigler(8), Xiaoying Bian(8), Zeyang Qu(6), Guanyue Xiong(5), Zhengying Shao(3), Shenyue Zhu(3), Zhong Wei(3), Jinyu Zhang(2), Chen Song(2)