Yingze Wang

University of Minnesota — United States

Materials Science · Physical Sciences

6h-index592citations37works1.62yr avg
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Research Topics

Machine Learning in Materials Science(11), Computational Drug Discovery Methods(9), Protein Structure and Dynamics(6), Genetics, Bioinformatics, and Biomedical Research(5), Complex Network Analysis Techniques(4)

Publications33 total

Ductal stenting versus Blalock-Taussig-Thomas fistula in a Latin-American country
Archivos de cardiolog�a de M�xico (English ed Internet)·2025Open Access
Double Ó?dynamicÓ� balloon atrial septostomy. New modification of Dr. RashkindÓ?s technique for cases with thickened interatrial septum
Archivos de cardiolog�a de M�xico (English ed Internet)·2025Open Access
Improved Treatment of 1–4 Interactions in Force Fields for Molecular Dynamics Simulations
Journal of Chemical Theory and Computation·2025
Polaris Challenge: Data-Driven Priors to Improve Docking for Pose Prediction
Journal of Chemical Information and Modeling·2025
dpdata: A Scalable Python Toolkit for Atomistic Machine Learning Data Sets
Journal of Chemical Information and Modeling·2025· 1 cited
More Accurate Binding Free Energy Prediction Using Protein Homology and Ligand-Based Transfer Learning
2025
Downregulation of Tra2α and Tra2β suppresses lipopolysaccharide-induced inflammation in macrophages by regulating MyD88 mRNA alternative splicing
Molecular and Cellular Biochemistry·2025
SynLlama: Generating Synthesizable Molecules and Their Analogs with Large Language Models
ACS Central Science·2025· 4 citedOpen Access
Assessing adult zebrafish despair-like behaviors in the small vertical cylinder immobility test (VCIT)
Journal of Neuroscience Methods·2025
Polaris Challenge: Data-driven Priors to Improve Docking for Pose Prediction
2025Open Access
A Computational Community Blind Challenge on Pan-Coronavirus Drug Discovery Data
2025· 2 citedOpen Access
Septostomía atrial con doble balón Ó?dinámicoÓ�. Nueva modificación de la técnica del Dr. Rashkind para casos con septum interatrial engrosado
Archivos de cardiología de México·2025Open Access
<i>Stent ductal versus</i> fístula de Blalock-Taussig-Thomas en un país de Latinoamérica
Archivos de cardiología de México·2025Open Access
A workflow to create a high-quality protein–ligand binding dataset for training, validation, and prediction tasks
Digital Discovery·2025· 12 citedOpen Access
A Workflow to Create a High-Quality Protein-Ligand Binding Dataset for Training, Validation, and Prediction Tasks
arXiv (Cornell University)·2024Open Access
SRSF3 Knockdown Inhibits Lipopolysaccharide-Induced Inflammatory Response in Macrophages
Current Issues in Molecular Biology·2024· 5 citedOpen Access
Mining for Potent Inhibitors through Artificial Intelligence and Physics: A Unified Methodology for Ligand Based and Structure Based Drug Design
Journal of Chemical Information and Modeling·2024· 5 citedOpen Access
Serine/Arginine-Rich Splicing Factor 7 Knockdown Inhibits Aerobic Glycolysis and Growth in HepG2 Cells by Regulating PKM2 Expression
Current Issues in Molecular Biology·2024· 5 citedOpen Access
Leak Proof PDBBind: A Reorganized Dataset of Protein-Ligand Complexes for More Generalizable Binding Affinity Prediction
PubMed·2023· 23 citedOpen Access
DMFF: An Open-Source Automatic Differentiable Platform for Molecular Force Field Development and Molecular Dynamics Simulation
Journal of Chemical Theory and Computation·2023· 43 cited
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Frequent Co-authors

Teresa Head‐Gordon(10), Kunyang Sun(9), Oufan Zhang(6), Linfeng Zhang(5), Dorian Bagni(5), Shi‐Kuo Chang(5), Junhan Chang(4), Xingyi Guan(4), Jerry Dwi Trijoyo Purnomo(4), José L. Colín-Ortiz(4), Javier López-Terrazas(4), Jinzhe Zeng(3), Duo Zhang(3), Yixiao Chen(3), Marián Rynik(3), Ping Tuo(3), Yifan Li(3), Jiameng Huang(3), Fengbo Yuan(3), Jiaxin Zhu(3)