Debashish Ray

University of Toronto — Canada

Biochemistry, Genetics and Molecular Biology · Life Sciences

30h-index5.3kcitations61works4.32yr avg
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Research Topics

RNA Research and Splicing(41), RNA modifications and cancer(37), Cancer-related molecular mechanisms research(19), RNA and protein synthesis mechanisms(19), Plant Virus Research Studies(5)

Publications61 total

CisBP-RNA: a web resource for eukaryotic RNA-binding proteins and their motifs
Nucleic Acids Research·2025· 3 citedOpen Access
A resource of RNA-binding protein motifs across eukaryotes reveals evolutionary dynamics and gene-regulatory function
Nature Biotechnology·2025· 10 citedOpen Access
At‐ <scp>RS31</scp> orchestrates hierarchical cross‐regulation of splicing factors and integrates alternative splicing with <scp>TOR</scp> ‐ <scp>ABA</scp> pathways
New Phytologist·2025· 9 citedOpen Access
A TATA-box-binding protein binds single-stranded DNA in two modes: To poly(G) tracts and to flexible DNA regions
Journal of Biological Chemistry·2025Open Access
At-RS31 orchestrates hierarchical cross-regulation of splicing factors and integrates alternative splicing with TOR-ABA pathways
2024· 1 citedOpen Access
Reconstructing the sequence specificities of RNA-binding proteins across eukaryotes
2024· 2 citedOpen Access
Uncovering a mammalian neural-specific poly(A) binding protein with unique properties
Genes & Development·2023· 4 citedOpen Access
RNA-binding proteins that lack canonical RNA-binding domains are rarely sequence-specific
Scientific Reports·2023· 48 citedOpen Access
PRIESSTESS: interpretable, high-performing models of the sequence and structure preferences of RNA-binding proteins
Nucleic Acids Research·2022· 29 citedOpen Access
Regulation of alternative polyadenylation by the C2H2-zinc-finger protein Sp1
Molecular Cell·2022· 56 cited
The X-linked splicing regulator MBNL3 has been co-opted to restrict placental growth in eutherians
PLoS Biology·2022· 15 citedOpen Access
The X-linked splicing regulator MBNL3 has been co-opted to restrict placental growth in eutherians
2021Open Access
The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Genome biology·2020· 121 citedOpen Access
Additional file 16 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
Additional file 5 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
Additional file 10 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
Additional file 9 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
Additional file 3 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
Additional file 13 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
Additional file 8 of The RNA-binding protein SERBP1 functions as a novel oncogenic factor in glioblastoma by bridging cancer metabolism and epigenetic regulation
Figshare·2020Open Access
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Frequent Co-authors

Timothy R. Hughes(37), Quaid Morris(32), Hong Zheng(19), Kevin Ha(14), Qiao Mei(10), Luiz O. F. Penalva(10), Benjamin J. Blencowe(9), Adam Kosti(9), Patricia Rosa De Araujo(9), Gabriela D. A. Guardia(9), Jennifer Chiou(9), Caihong Yi(9), Fabiana Meliso(9), Talia Delambre(9), Suzanne S. Burns(9), Franziska K. Lorbeer(9), Fanny Georgi(9), Markus Flosbach(9), Sarah Klinnert(9), Anne Jenseit(9)