Clark Mobarry

J. Craig Venter Institute — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

18h-index26.1kcitations32works0.02yr avg
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Research Topics

Genomics and Phylogenetic Studies(13), RNA and protein synthesis mechanisms(11), Chromosomal and Genetic Variations(7), Parallel Computing and Optimization Techniques(6), Solar and Space Plasma Dynamics(6)

Publications31 total

Aggressive assembly of pyrosequencing reads with mates
Bioinformatics·2008· 606 citedOpen Access
A Space-Efficient Construction of the Burrows–Wheeler Transform for Genomic Data
Journal of Computational Biology·2005· 31 cited
Finding Anchors for Genomic Sequence Comparison
Journal of Computational Biology·2005· 15 cited
Gene and alternative splicing annotation with AIR
Genome Research·2005· 78 citedOpen Access
ThurGood: Evaluating Assembly-to-Assembly Mapping
Journal of Computational Biology·2004
ThurGood: Evaluating Assembly-to-Assembly Mapping
Journal of Computational Biology·2004· 5 cited
The Lyon–Fedder–Mobarry (LFM) global MHD magnetospheric simulation code
Journal of Atmospheric and Solar-Terrestrial Physics·2004· 523 cited
Whole-genome shotgun assembly and comparison of human genome assemblies
Proceedings of the National Academy of Sciences·2004· 184 citedOpen Access
Finding anchors for genomic sequence comparison
2004· 9 cited
Preliminary insights on shared memory PIC code performance on the Convex Exemplar SPP1000
2002· 1 cited
Particle-mesh techniques on the MasPar
2002· 2 cited
HRUNTING: a distributed shared memory system for the BEOWULF parallel workstation
2002· 4 cited
The practicality of SIMD for scientific computing
2002· 2 cited
The Genome Sequence of the Malaria Mosquito <i>Anopheles gambiae</i>
Science·2002· 2.0k cited
Efficiently detecting polymorphisms during the fragment assembly process
Bioinformatics·2002· 22 citedOpen Access
A Comparison of Whole-Genome Shotgun-Derived Mouse Chromosome 16 and the Human Genome
Science·2002· 370 cited
Design of a compartmentalized shotgun assembler for the human genome
Bioinformatics·2001· 59 cited
The Sequence of the Human Genome
Science·2001· 13.6k cited
PARAMESH: A parallel adaptive mesh refinement community toolkit
Computer Physics Communications·2000· 659 citedOpen Access
A Whole-Genome Assembly of <i>Drosophila</i>
Science·2000· 1.5k cited
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Frequent Co-authors

Ian Dew(8), Michael J. Flanigan(7), Aaron L. Halpern(7), Jason Miller(7), Granger G. Sutton(6), Karin Remington(6), Eugene W. Myers(5), Randall Bolanos(5), Liliana Florea(5), Saul Kravitz(5), Knut Reinert(5), Zhongwu Lai(5), Deborah Nusskern(5), Brian P. Walenz(5), P. J. MacNeice(5), Mark D. Adams(4), Daniel H. Huson(4), Xiangqun Zheng-Bradley(4), Arthur L. Delcher(4), Daniel Fasulo(4)