Erva Ulusoy

Hacettepe University — Turkey

Biochemistry, Genetics and Molecular Biology · Life Sciences

5h-index150citations13works2.62yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

Bioinformatics and Genomic Networks(6), Machine Learning in Bioinformatics(6), Computational Drug Discovery Methods(4), Biomedical Text Mining and Ontologies(3), Protein Structure and Dynamics(2)

Publications13 total

OmniPath: integrated knowledgebase for multi-omics analysis
Nucleic Acids Research·2025· 4 citedOpen Access
OmniPath: integrated knowledgebase for multi-omics analysis
2025Open Access
ProtHGT: Heterogeneous Graph Transformers for Automated Protein Function Prediction Using Biological Knowledge Graphs and Language Models
2025Open Access
A Benchmarking Platform for Assessing Protein Language Models on Function-related Prediction Tasks
2025Open Access
Protein language models for predicting drug–target interactions: Novel approaches, emerging methods, and future directions
Current Opinion in Structural Biology·2025· 7 citedOpen Access
A Benchmarking Platform for Assessing Protein Language Models on Function-Related Prediction Tasks
Methods in molecular biology·2025
Mutual annotation‐based prediction of protein domain functions with <scp>Domain2GO</scp>
Protein Science·2024· 7 citedOpen Access
Democratizing knowledge representation with BioCypher
Nature Biotechnology·2023· 61 citedOpen Access
SELFormer: molecular representation learning via SELFIES language models
Machine Learning Science and Technology·2023· 56 citedOpen Access
SELFormer: Molecular Representation Learning via SELFIES Language Models
arXiv (Cornell University)·2023· 13 citedOpen Access
Democratising Knowledge Representation with BioCypher
arXiv (Cornell University)·2022· 2 citedOpen Access
Mutual Annotation-Based Prediction of Protein Domain Functions with Domain2GO
2022Open Access
Assessing the Functional Properties of the TMCO1 Sequence Variants by Using In Silico Analyses
Düzce Üniversitesi Bilim ve Teknoloji Dergisi·2019Open Access

Frequent Co-authors

Tunca Doğan(11), Atabey Ünlü(5), Balázs Bohár(4), Charles Tapley Hoyt(4), Tamás Korcsmáros(4), Bünyamin Şen(4), Dénes Türei(4), Julio Sáez-Rodríguez(4), Elif Çevrim(4), Melih Gökay Yiğit(3), Melih Darcan(3), Sebastian Lobentanzer(2), Patrick Aloy(2), Jan Baumbach(2), Katharina Danhauser(2), Johann Dréo(2), Ian Dunham(2), Adrià Fernandez-Torras(2), Benjamin M. Gyori(2), Michael Hartung(2)