Venkat S. Malladi

Microsoft (United States) — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

38h-index11.5kcitations128works1.22yr avg
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Research Topics

RNA modifications and cancer(33), Epigenetics and DNA Methylation(26), Genomics and Chromatin Dynamics(25), Cancer Genomics and Diagnostics(25), Genomics and Phylogenetic Studies(11)

Publications127 total

broadinstitute/viral-pipelines: v2.5.16.0
Zenodo (CERN European Organization for Nuclear Research)·2025Open Access
Data from Epigenetic Repression of STING by MYC Promotes Immune Evasion and Resistance to Immune Checkpoint Inhibitors in Triple-Negative Breast Cancer
2025Open Access
Supplementary Data from Epigenetic Repression of STING by MYC Promotes Immune Evasion and Resistance to Immune Checkpoint Inhibitors in Triple-Negative Breast Cancer
2025Open Access
BioAgents: Bridging the gap in bioinformatics analysis with multi-agent systems
Scientific Reports·2025· 4 citedOpen Access
Innate and adaptive immune features associated with immune-related adverse events
Journal for ImmunoTherapy of Cancer·2025· 8 citedOpen Access
Interdisciplinary Collaboration to Develop a Custom Genomic Analysis Pipeline for the Clinical Laboratory: Hepatitis B Virus and Cytomegalovirus Antiviral Resistance Genotyping
Clinical Chemistry·2025Open Access
X-Linked Cancer-Associated Polypeptide (XCP) from <i>lncRNA1456</i> Cooperates with PHF8 to Regulate Gene Expression and Cellular Pathways in Breast Cancer
2025Open Access
sciLaMA: A Single-Cell Representation Learning Framework to Leverage Prior Knowledge from Large Language Models
2025· 2 citedOpen Access
KLF13 promotes SLE pathogenesis by modifying chromatin accessibility of key proinflammatory cytokine genes
Communications Biology·2024· 3 citedOpen Access
Continuous Analysis: Evolution of Software Engineering and Reproducibility for Science
arXiv (Cornell University)·2024Open Access
The GA4GH Task Execution Application Programming Interface: Enabling Easy Multicloud Task Execution
Computing in Science & Engineering·2024Open Access
A multi-omic single-cell landscape of human gynecologic malignancies
UNC Libraries·2024Open Access
The GA4GH Task Execution API: Enabling Easy Multi Cloud Task Execution
arXiv (Cornell University)·2024Open Access
Optimizing genomics pipeline execution with integer linear programming
2024Open Access
The ENCODE Uniform Analysis Pipelines
2023· 38 citedOpen Access
Tumor loss-of-function mutations in STK11/LKB1 induce cachexia
JCI Insight·2023· 17 citedOpen Access
Preoperative Screening Tools Overestimate NIFTP Malignancy Risk: A Single Institution Experience
Journal of the American College of Surgeons·2023
The ENCODE Uniform Analysis Pipelines
2023· 88 citedOpen Access
Novel long non-coding RNAs associated with inflammation and macrophage activation in human
Scientific Reports·2023· 32 citedOpen Access
Abstract P6-12-03: Proinflammatory and estrogen signaling modulates the chemoresistance and metastasis of breast cancer cells through post-translational modifications of pioneering factor FOXA1
Cancer Research·2023
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Frequent Co-authors

Cricket A. Sloan(11), W. James Kent(10), Vanessa M. Kirkup(8), Katrina Learned(8), Kate R. Rosenbloom(8), Brian T. Lee(8), Timothy R. Dreszer(8), Melissa Cline(7), Esther T. Chan(6), Jean M. Davidson(6), Benjamin C. Hitz(6), Marcus Ho(6), Laurence D. Rowe(6), Nikhil R. Podduturi(6), Forrest Y. Tanaka(6), Eurie L. Hong(6), J. Michael Cherry(6), Spencer Barnes(6), Jessica Satkoski(6), David Glenn Smith(6)