Guanxing Chen

The University of Texas MD Anderson Cancer Center — United States

Computer Science · Physical Sciences

29h-index2.8kcitations80works10.92yr avg
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Research Topics

Computational Drug Discovery Methods(22), Machine Learning in Materials Science(11), Food composition and properties(8), Protein Structure and Dynamics(7), Machine Learning in Bioinformatics(7)

Publications80 total

scProtoTransformer: Scalable Reference Mapping Across Molecules, Cells and Donors
2025
Spinal α2δ-1 induces GluA3 degradation to regulate assembly of calcium-permeable AMPA receptors and pain hypersensitivity
Journal of Clinical Investigation·2025Open Access
scKAN: interpretable single-cell analysis for cell-type-specific gene discovery and drug repurposing via Kolmogorov-Arnold networks
Genome biology·2025· 3 citedOpen Access
Modal-NexT: Towards unified heterogeneous cellular data integration
Information Fusion·2025· 2 cited
Author response for "Pre-trained Language Models for Protein and Molecular Design"
2025
CoupleMDA: Metapath-Induced Structural-Semantic Coupling Network for miRNA-Disease Association Prediction
International Journal of Molecular Sciences·2025· 1 citedOpen Access
Phase-modulated dynamical decoupling sequences robust to systematic amplitude error
Chinese Physics B·2025
scKAN: Interpretable Single-cell Analysis for Cell-type-specific Gene Discovery and Drug Repurposing via Kolmogorov-Arnold Networks
2025· 3 citedOpen Access
Dual modality feature fused neural network integrating binding site information for drug target affinity prediction
npj Digital Medicine·2025· 17 citedOpen Access
Pre-trained language models for protein and molecular design
Physical Chemistry Chemical Physics·2025· 2 cited
Knowledge-based inductive bias and domain adaptation for cell type annotation
Communications Biology·2024· 6 citedOpen Access
Modal-nexus auto-encoder for multi-modality cellular data integration and imputation
Nature Communications·2024· 24 citedOpen Access
MMFA-DTA: Multimodal Feature Attention Fusion Network for Drug-Target Affinity Prediction for Drug Repurposing Against SARS-CoV-2
Journal of Chemical Theory and Computation·2024· 4 cited
De novo generation of SARS-CoV-2 antibody CDRH3 with a pre-trained generative large language model
Nature Communications·2024· 50 citedOpen Access
Interaction-Based Inductive Bias in Graph Neural Networks: Enhancing Protein-Ligand Binding Affinity Predictions From 3D Structures
IEEE Transactions on Pattern Analysis and Machine Intelligence·2024· 30 cited
Transmembrane determinants of voltage-gating differences between BK (Slo1) and Slo3 channels
Biophysical Journal·2024· 1 citedOpen Access
MFTrans: A multi-feature transformer network for protein secondary structure prediction
International Journal of Biological Macromolecules·2024· 13 cited
Comprehensive View Embedding Learning for Single-Cell Multimodal Integration
Proceedings of the AAAI Conference on Artificial Intelligence·2024· 8 citedOpen Access
Dynamic network biomarker C1QTNF1 regulates tumor formation at the tipping point of hepatocellular carcinoma
Biomolecules and Biomedicine·2024· 1 citedOpen Access
Meta-MolNet: A Cross-Domain Benchmark for Few Examples Drug Discovery
IEEE Transactions on Neural Networks and Learning Systems·2024· 26 cited
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Frequent Co-authors

Calvin Yu‐Chian Chen(25), Xiaohui Li(9), Haohuai He(8), Dongwen Lv(7), Qiujie Lv(7), Lu Zhao(6), Yueming Yan(6), Jiantang Zhu(5), Ziduo Yang(5), Weihe Zhong(5), Caixia Han(5), Yueming Yan(5), Yueming Yan(4), Jianwen Zhou(4), Zhenchao Tang(4), Xiaodong Fang(3), Zhiqiang Xiong(3), Yabing Zhu(3), Dingding Fan(3), Yue Feng(3)