Petra Kukanja

Karolinska Institutet — Sweden

Biochemistry, Genetics and Molecular Biology · Life Sciences

15h-index1.7kcitations25works27.92yr avg
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Research Topics

Single-cell and spatial transcriptomics(16), Neuroinflammation and Neurodegeneration Mechanisms(9), Neurogenesis and neuroplasticity mechanisms(6), Genomics and Chromatin Dynamics(5), Immune cells in cancer(5)

Publications25 total

Distinct transcriptomic and epigenomic responses of mature oligodendrocytes during disease progression in a mouse model of multiple sclerosis
Nature Neuroscience·2025Open Access
Spatial dynamics of brain development and neuroinflammation
Nature·2025· 9 citedOpen Access
snRNA-seq stratifies multiple sclerosis patients into distinct white matter glial responses
Universität Zürich, ZORA·2025Open Access
snRNA-seq stratifies multiple sclerosis patients into distinct white matter glial responses
Neuron·2024· 36 citedOpen Access
Disease-associated oligodendroglia: a putative nexus in neurodegeneration
Trends in Immunology·2024· 20 citedOpen Access
Spatial dynamics of mammalian brain development and neuroinflammation by multimodal tri-omics mapping
2024· 23 citedOpen Access
Spatial dynamics of mammalian brain development and neuroinflammation by multimodal tri-omics mapping
2024· 40 citedOpen Access
Developmental origin of oligodendrocytes determines their function in the adult brain
Nature Neuroscience·2024· 34 citedOpen Access
Cellular architecture of evolving neuroinflammatory lesions and multiple sclerosis pathology
Cell·2024· 89 citedOpen Access
Distinct transcriptomic and epigenomic responses of mature oligodendrocytes during disease progression in a mouse model of multiple sclerosis
2023· 3 citedOpen Access
Single cell-resolution <i>in situ</i> sequencing elucidates spatial dynamics of multiple sclerosis lesion and disease evolution
2023· 10 citedOpen Access
Spatial epigenome–transcriptome co-profiling of mammalian tissues
Nature·2023· 360 citedOpen Access
Spatial profiling of chromatin accessibility in mouse and human tissues
Nature·2022· 329 citedOpen Access
Spatially resolved epigenome-transcriptome co-profiling of mammalian tissues at the cellular level
Research Square (Research Square)·2022· 7 citedOpen Access
Spatial and temporal heterogeneity in the lineage progression of fine oligodendrocyte subtypes
BMC Biology·2022· 56 citedOpen Access
Developmental landscape of human forebrain at a single-cell level identifies early waves of oligodendrogenesis
Developmental Cell·2022· 79 citedOpen Access
Single nuclei RNAseq stratifies multiple sclerosis patients into distinct white matter glial responses
2022· 28 citedOpen Access
Spatial-CUT&amp;Tag: Spatially resolved chromatin modification profiling at the cellular level
Science·2022· 317 citedOpen Access
Developmental landscape of human forebrain at a single-cell level unveils early waves of oligodendrogenesis
2021· 7 citedOpen Access
Spatial cell type mapping of the oligodendrocyte lineage in the mouse juvenile and adult CNS with in situ sequencing
2021· 2 citedOpen Access
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Frequent Co-authors

Gonçalo Castelo‐Branco(21), Eneritz Agirre(8), Leslie A. Kirby(8), Di Zhang(7), Rong Fan(7), Markus M. Hilscher(7), Mats Nilsson(7), Yang Liu(6), Christoffer Mattsson Langseth(6), Chika Yokota(5), André Ortlieb Guerreiro‐Cacais(5), Yanxiang Deng(4), Marek Bartošovič(4), Graham Su(4), David van Bruggen(4), Tomas Olsson(4), Mukund Kabbe(4), Mandy Meijer(4), Tony Jimenez-Beristain(4), Sai Ma(3)