Vladimı́r Sychrovský

Czech Academy of Sciences — Czech Republic

Biochemistry, Genetics and Molecular Biology · Life Sciences

24h-index2.0kcitations85works0.32yr avg
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Research Topics

DNA and Nucleic Acid Chemistry(50), Advanced NMR Techniques and Applications(15), Advanced biosensing and bioanalysis techniques(14), RNA and protein synthesis mechanisms(14), Molecular spectroscopy and chirality(12)

Publications85 total

Deciphering Dickerson–Drew DNA Equilibrium beyond the BI/BII DNA Dichotomy by Interpretation of <sup>31</sup>P NMR Parameters
Journal of Chemical Theory and Computation·2025Open Access
Capturing a glycosylase reaction intermediate in DNA repair by freeze-trapping of a pH-responsive hOGG1 mutant
Nucleic Acids Research·2025· 1 citedOpen Access
Dielectric properties of polymer mixtures with CaTiO <sub>3</sub> perovskite: conventional and plasma-treated ceramic powders
International Journal of Sustainable Engineering·2024Open Access
Probabilistic Interpretation of NMR <i>J</i>-Couplings Determines BI–BII State Equilibria in DNA
Journal of Chemical Theory and Computation·2022· 3 cited
Physicochemical Characterization of the Catalytic Unit of Hammerhead Ribozyme and Its Relationship with the Catalytic Activity
Biophysica·2022· 1 citedOpen Access
Quantitative Analysis of Nanorough Hydrogenated Si(111) Surfaces through Vibrational Spectral Assignment by Periodic DFT Calculations
The Journal of Physical Chemistry C·2022· 3 citedOpen Access
Additive transport in DNA molecular circuits
Journal of Materials Chemistry C·2022· 7 citedOpen Access
Raman spectroscopy and DFT calculations of PEDOT:PSS in a dipolar field
Physical Chemistry Chemical Physics·2021· 67 cited
The <scp>Ad‐MD</scp> method to calculate <scp>NMR</scp> shift including effects due to conformational dynamics: The <scp><sup>31</sup>P NMR</scp> shift in <scp>DNA</scp>
Journal of Computational Chemistry·2021· 8 cited
FTIR Measurement of the Hydrogenated Si(100) Surface: The Structure-Vibrational Interpretation by Means of Periodic DFT Calculation
The Journal of Physical Chemistry C·2021· 5 cited
HERMES – A Software Tool for the Prediction and Analysis of Magnetic‐Field‐Induced Residual Dipolar Couplings in Nucleic Acids
ChemPlusChem·2020Open Access
Correction to “Interstrand Charge Transport within Metallo-DNA: the Effect Due to Hg(II)- and Ag(I)-Mediated Base Pairs”
The Journal of Physical Chemistry C·2020
QM and QM/MM umbrella sampling MD study of the formation of Hg(II)–thymine bond: Model for evaluation of the reaction energy profiles in solutions with constant pH
Journal of Computational Chemistry·2020· 3 cited
Interstrand Charge Transport within Metallo-DNA: the Effect Due to Hg(II)- and Ag(I)-Mediated Base Pairs
The Journal of Physical Chemistry C·2020· 4 cited
Ascorbigen A—NMR identification
Magnetic Resonance in Chemistry·2019· 3 cited
Structural interpretation of the <sup>31</sup>P NMR chemical shifts in thiophosphate and phosphate: key effects due to spin–orbit and explicit solvent
Physical Chemistry Chemical Physics·2019· 13 cited
hOGG1 BER酵素による8-オキソ-G切除
日本環境変異原学会大会プログラム・要旨集·2019
The theoretical calculations of charge transport through DNA metal-mediated base pairs
2019
The structural model of Zika virus RNA-dependent RNA polymerase in complex with RNA for rational design of novel nucleotide inhibitors
Scientific Reports·2018· 34 citedOpen Access
The mechanism of the glycosylase reaction with hOGG1 base-excision repair enzyme: concerted effect of Lys249 and Asp268 during excision of 8-oxoguanine
Nucleic Acids Research·2017· 23 citedOpen Access
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Frequent Co-authors

Jakub Šebera(18), Yoshiyuki Tanaka(14), Jiřı́ Šponer(13), Zuzana Vokáčová(12), Bohdan Schneider(9), Miloš Buděšı́nský(8), Lukáš Trantı́rek(8), Akira Ono(7), Takenori Dairaku(6), Chojiro Kojima(6), Ladislav Benda(6), Petr Bouř(6), Ondřej Páv(5), Jiří Fukal(5), Yoshinori Kondo(4), Judit E. Šponer(4), F. Matthias Bickelhaupt(4), Michal Straka(4), Ivan Rosenberg(4), Pavel Hobza(4)