Jiří Fukal

Czech Academy of Sciences — Czech Republic

Biochemistry, Genetics and Molecular Biology · Life Sciences

6h-index85citations17works0.02yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

DNA and Nucleic Acid Chemistry(13), Advanced biosensing and bioanalysis techniques(4), Advanced NMR Techniques and Applications(3), DNA Repair Mechanisms(2), Metal complexes synthesis and properties(2)

Publications17 total

Deciphering Dickerson–Drew DNA Equilibrium beyond the BI/BII DNA Dichotomy by Interpretation of <sup>31</sup>P NMR Parameters
Journal of Chemical Theory and Computation·2025Open Access
Probabilistic Interpretation of NMR <i>J</i>-Couplings Determines BI–BII State Equilibria in DNA
Journal of Chemical Theory and Computation·2022· 3 cited
Additive transport in DNA molecular circuits
Journal of Materials Chemistry C·2022· 7 citedOpen Access
The <scp>Ad‐MD</scp> method to calculate <scp>NMR</scp> shift including effects due to conformational dynamics: The <scp><sup>31</sup>P NMR</scp> shift in <scp>DNA</scp>
Journal of Computational Chemistry·2021· 8 cited
Correction to “Interstrand Charge Transport within Metallo-DNA: the Effect Due to Hg(II)- and Ag(I)-Mediated Base Pairs”
The Journal of Physical Chemistry C·2020
Interstrand Charge Transport within Metallo-DNA: the Effect Due to Hg(II)- and Ag(I)-Mediated Base Pairs
The Journal of Physical Chemistry C·2020· 4 cited
Structural interpretation of the <sup>31</sup>P NMR chemical shifts in thiophosphate and phosphate: key effects due to spin–orbit and explicit solvent
Physical Chemistry Chemical Physics·2019· 13 cited
The theoretical calculations of charge transport through DNA metal-mediated base pairs
2019
The benchmark of <sup>31</sup>P NMR parameters in phosphate: a case study on structurally constrained and flexible phosphate
Physical Chemistry Chemical Physics·2017· 24 citedOpen Access
CCDC 1435942: Experimental Crystal Structure Determination
The Cambridge Structural Database·2017Open Access
Benchmark Theoretical and Experimental Study on <sup>15</sup>N NMR Shifts of Oxidatively Damaged Guanine
The Journal of Physical Chemistry B·2016· 11 cited
Synthesis of locked cyclohexene and cyclohexane nucleic acids (LCeNA and LCNA) with modified adenosine units
Organic & Biomolecular Chemistry·2015· 6 citedOpen Access
The activation of N-glycosidic bond cleavage performed by base-excision repair enzyme hOGG1; theoretical study of the role of Lys 249 residue in activation of G, OxoG and FapyG
RSC Advances·2014· 8 cited
Novel conformationally locked nucleosides and oligonucleotides based on bicyclo[3.2.1]octane scaffold as a pseudosugar moiety
2014
MECHANISM OF BASE EXCISION WITH THE hOGG1 DNA REPAIR ENZYME
ASEP·2014· 1 cited
Study of HincII endonuclease by molecular dynamics methods
2010
Computational study of restriction endonuclease HincII
2007

Frequent Co-authors

Vladimı́r Sychrovský(15), Jakub Šebera(13), Miloš Buděšı́nský(5), Yoshiyuki Tanaka(5), Radim Nencka(5), Ivan Rosenberg(4), Martin Dračínský(4), Michal Šála(4), Ondřej Páv(3), Petr Jurečka(3), Marie Zgarbová(3), David Řeha(3), Blanka Klepetářová(2), Veronika Holečková(2), Lukáš Trantı́rek(2), Milan Dejmek(2), Eliška Procházková(2), Hubert Hřebabecký(2), Jiří Rybáček(2), P. Novák(2)