Volker Brendel

Indiana University Bloomington — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

47h-index8.0kcitations131works1.02yr avg
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Research Topics

Genomics and Phylogenetic Studies(57), RNA and protein synthesis mechanisms(48), Chromosomal and Genetic Variations(23), Machine Learning in Bioinformatics(20), RNA Research and Splicing(18)

Publications131 total

A PRDM16-CtBP1/2 complex interacts with HDAC1/2 to regulate transcriptional programs of neurogenesis and guide cortical neuron migration
Development·2025· 2 cited
A PRDM16-CtBP1/2 Complex Interacts with HDAC1/2 to Regulate Transcriptional Programs of Neurogenesis and Guide Cortical Neuron Migration
2024Open Access
iLoci: robust evaluation of genome content and organization for provisional and mature genome assemblies
NAR Genomics and Bioinformatics·2022Open Access
Tools and applications for integrative analysis of DNA methylation in social insects
Molecular Ecology Resources·2021· 4 cited
iLoci: Robust evaluation of genome content and organization for provisional and mature genome assemblies
2021Open Access
Tools and applications for integrative analysis of DNA methylation in social insects
2021· 4 citedOpen Access
Flexible analysis of TSS mapping data and detection of TSS shifts with TSRexploreR
NAR Genomics and Bioinformatics·2021· 17 citedOpen Access
Flexible analysis of TSS mapping data and detection of TSS shifts with TSRexploreR
2021Open Access
The Xa7 resistance gene guards the rice susceptibility gene SWEET14 against exploitation by the bacterial blight pathogen
Plant Communications·2021· 64 citedOpen Access
Simple and efficient profiling of transcription initiation and transcript levels with STRIPE-seq
Genome Research·2020· 41 citedOpen Access
Simple and efficient measurement of transcription initiation and transcript levels with STRIPE-seq
2020Open Access
SRAssembler: Selective Recursive local Assembly of homologous genomic regions
BMC Bioinformatics·2019· 16 citedOpen Access
Jetstream: A Novel Cloud System for Science
2019· 2 cited
Changes in gene DNA methylation and expression networks accompany caste specialization and age‐related physiological changes in a social insect
Molecular Ecology·2019· 43 citedOpen Access
Additional file 2 of SRAssembler: Selective Recursive local Assembly of homologous genomic regions
Figshare·2019Open Access
Referee report. For: de.NBI Cloud federation through ELIXIR AAI [version 1; peer review: 2 approved, 1 not approved]
Faculty of 1000 Research Ltd·2019Open Access
Additional file 4 of SRAssembler: Selective Recursive local Assembly of homologous genomic regions
Figshare·2019Open Access
Additional file 3 of SRAssembler: Selective Recursive local Assembly of homologous genomic regions
Figshare·2019Open Access
Using RAMPAGE to Identify and Annotate Promoters in Insect Genomes
Methods in molecular biology·2018· 3 cited
From small RNA discoveries to a new paradigm in computational genomics?
New Phytologist·2018· 3 citedOpen Access
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Frequent Co-authors

Samuel Karlin(10), Virginia Walbot(5), Carolyn J. Lawrence(4), Adam J. Bogdanove(3), Stefan Kurtz(3), B. Edwin Blaisdell(3), Jon Duvick(3), Frank F. White(3), Wei Zhu(3), Shailesh K. Lal(3), Daniel Standage(2), Bingbing Wang(2), Michael E. Sparks(2), Philipp Bücher(2), Matthew D. Wilkerson(2), Hong Lü(2), Prabhu B. Patil(2), Marie‐Anne Van Sluys(2), Robert P. Ryan(2), J. Maxwell Dow(2)