Sarah Nadeau

SIB Swiss Institute of Bioinformatics — Switzerland

Medicine · Health Sciences

17h-index2.4kcitations35works28.02yr avg
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Research Topics

SARS-CoV-2 and COVID-19 Research(22), SARS-CoV-2 detection and testing(16), COVID-19 epidemiological studies(12), Animal Virus Infections Studies(5), COVID-19 diagnosis using AI(4)

Publications34 total

Estimates of early outbreak-specific SARS-CoV-2 epidemiological parameters from genomic data
Proceedings of the National Academy of Sciences·2024· 20 citedOpen Access
Influenza transmission dynamics quantified from RNA in wastewater in Switzerland
Swiss Medical Weekly·2024· 36 citedOpen Access
Abundance of microbial community genes encoding terminal proteins of the aerobic and denitrification respiratory chains as indicators of ecohydrologic gradients in a coastal temperate rainforest
Ecological Indicators·2023Open Access
Influenza transmission dynamics quantified from wastewater
2023· 6 citedOpen Access
Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data
Science Translational Medicine·2022· 34 citedOpen Access
A Phylogeny-aware GWAS Framework to Correct for Heritable Pathogen Effects on Infectious Disease Traits
Molecular Biology and Evolution·2022Open Access
Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC
Nature Microbiology·2022· 173 citedOpen Access
Advancing genomic epidemiology by addressing the bioinformatics bottleneck: Challenges, design principles, and a Swiss example
Epidemics·2022· 6 citedOpen Access
DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2
BMC Genomics·2022· 5 citedOpen Access
Additional file 4 of DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2
Figshare·2022Open Access
Additional file 2 of DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2
Figshare·2022Open Access
Additional file 3 of DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2
Figshare·2022Open Access
CoV-Spectrum: analysis of globally shared SARS-CoV-2 data to identify and characterize new variants
Bioinformatics·2021· 343 citedOpen Access
A phylogeny-aware GWAS framework to correct for heritable pathogen effects on infectious disease traits
2021Open Access
Charting changes in a pathogen’s genome yields clues about its past and hints about its future
2021Open Access
Swiss public health measures associated with reduced SARS-CoV-2 transmission using genome data
2021· 10 citedOpen Access
DeepSARS: simultaneous diagnostic detection and genomic surveillance of SARS-CoV-2
2021Open Access
Quantification of the spread of SARS-CoV-2 variant B.1.1.7 in Switzerland
Epidemics·2021· 48 citedOpen Access
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020
Nature·2021· 449 citedOpen Access
SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021—Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing
Microorganisms·2021· 37 citedOpen Access
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Frequent Co-authors

Tanja Stadler(28), Christian Beisel(14), Chaoran Chen(11), Ina Nissen(11), Elodie Burcklen(11), Timothy G. Vaughan(10), Ivan Topolsky(9), Mirjam Feldkamp(9), Niko Beerenwinkel(9), Hans H. Hirsch(9), Kim Philipp Jablonski(8), Adrian Egli(8), Christiane Beckmann(8), Maurice Redondo(8), Christoph Noppen(8), Emma B. Hodcroft(7), Tim Roloff(7), Madlen Stange(7), Richard A. Neher(6), Jana S. Huisman(6)