Ercheng Wang

Zhejiang Lab — China

Biochemistry, Genetics and Molecular Biology · Life Sciences

22h-index4.2kcitations57works5.12yr avg
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Research Topics

Protein Structure and Dynamics(20), Computational Drug Discovery Methods(17), RNA and protein synthesis mechanisms(10), Aeroelasticity and Vibration Control(6), Enzyme Structure and Function(6)

Publications57 total

AutoLoop is an autoregressive deep learning method for protein loop prediction with high accuracy
Cell Reports Physical Science·2026· 1 citedOpen Access
Unified and explainable molecular representation learning for imperfectly annotated data from the hypergraph view
Nature Communications·2025· 1 citedOpen Access
Unveiling the evolution of antimicrobial peptides in gut microbes via foundation-model-powered framework
Cell Reports·2025· 7 citedOpen Access
HawkDock version 2: an updated web server to predict and analyze the structures of protein–protein complexes
Nucleic Acids Research·2025· 18 citedOpen Access
AutoLoop: a novel autoregressive deep learning method for protein loop prediction with high accuracy
arXiv (Cornell University)·2025Open Access
Structural Insights into an Antiparallel Chair‐Type G‐Quadruplex From the Intron of <i>NOP56</i> Oncogene
Advanced Science·2025· 1 citedOpen Access
Comprehensive Evaluation of End-Point Free Energy Methods in DNA–Ligand Interaction Predictions
Journal of Chemical Information and Modeling·2025· 4 cited
Unveiling the Evolution of Antimicrobial Peptides in Gut Microbes via Foundation Model-Powered Framework
2025Open Access
End-Point Affinity Estimation of Galectin Ligands by Classical and Semiempirical Quantum Mechanical Potentials
Journal of Chemical Information and Modeling·2025· 7 citedOpen Access
Discovery of Novel Na <sub>v</sub> 1.7-Selective Inhibitors with the 1 <i>H</i> -Indole-3-Propionamide Scaffold for Effective Pain Relief
Research·2025· 2 citedOpen Access
Genos: a human-centric genomic foundation model
GigaScience·2025· 2 citedOpen Access
Enabling target-aware molecule generation to follow multi objectives with Pareto MCTS
Communications Biology·2024· 3 citedOpen Access
Rapid screening of multi-point mutations for enzyme thermostability modification by utilizing computational tools
Future Generation Computer Systems·2024· 7 cited
Comparative Analysis of Deep Generative Model for Industrial Enzyme Design
Current Bioinformatics·2024
Discovery of Novel Anti‐Resistance AR Antagonists Guided by Funnel Metadynamics Simulation
Advanced Science·2024· 9 citedOpen Access
Highly Accurate and Efficient Deep Learning Paradigm for Full-Atom Protein Loop Modeling with KarmaLoop
Research·2024· 2 citedOpen Access
Assessing the performance of MM/PBSA and MM/GBSA methods. 10. Prediction reliability of binding affinities and binding poses for RNA–ligand complexes
Physical Chemistry Chemical Physics·2024· 22 cited
ProRefiner: an entropy-based refining strategy for inverse protein folding with global graph attention
Nature Communications·2023· 20 citedOpen Access
ComDock: A novel approach for protein-protein docking with an efficient fusing strategy
Computers in Biology and Medicine·2023· 18 cited
PMF-CPI: assessing drug selectivity with a pretrained multi-functional model for compound–protein interactions
Journal of Cheminformatics·2023· 25 citedOpen Access
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Frequent Co-authors

Tingjun Hou(26), Zhe Wang(12), Gaoqi Weng(10), Yu Kang(9), Lei Xu(8), Guangyong Chen(8), Chao Shen(7), Xujun Zhang(7), Jingjun Zhang(7), Lili He(6), Ruizhen Gao(6), Huiyong Sun(5), Feng Zhu(5), Dan Li(5), Dejun Jiang(5), Chang‐Yu Hsieh(5), Odin Zhang(5), Hongyan Du(5), Weitao Fu(5), Pheng‐Ann Heng(5)