Ryan R. Brinkman

Boston University — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

57h-index14.7kcitations212works4.52yr avg
OpenAlex↗ORCID↗Google Scholar↗Lab page↗

Accepting Students?

No reports yet. Know if this professor is taking students?

Research Topics

Single-cell and spatial transcriptomics(92), Cell Image Analysis Techniques(43), Gene expression and cancer classification(41), Biomedical Text Mining and Ontologies(22), Lymphoma Diagnosis and Treatment(20)

Publications212 total

Cyt‐Geist: Current and Future Challenges in Cytometry: Reports of the <scp>CYTO</scp> 2025 Conference Workshops
Cytometry Part A·2025Open Access
Higher Promoter Methylation of the Ubiquitin-Associated and SH3 Domain Containing A ( <i>UBASH3A</i> ) Gene Is Associated With T-Lymphocyte Ontogeny and Reduced Susceptibility to Early-Onset Sepsis
The Journal of Infectious Diseases·2025Open Access
Citizen science gamers enable automated flow cytometry gating through machine learning
2025Open Access
Artificial Intelligence Issue Highlights
Cytometry Part B Clinical Cytometry·2025
<scp>AI</scp> in flow cytometry: Current applications and future directions
Cytometry Part B Clinical Cytometry·2025· 3 cited
Reproducible detection of antigen-specific T cells and Tregs via standardized and automated activation-induced marker assay workflows
2025Open Access
A plasma protein biomarker signature that differentiates acute rheumatic fever from related clinical presentations
2025Open Access
DNA Methylation signatures underpinning blood neutrophil to lymphocyte ratio during first week of human life
Nature Communications·2024· 8 citedOpen Access
Issue highlights—July 2024
Cytometry Part B Clinical Cytometry·2024Open Access
<scp>MAGIC‐DR</scp>: An interpretable machine‐learning guided approach for acute myeloid leukemia measurable residual disease analysis
Cytometry Part B Clinical Cytometry·2024· 14 citedOpen Access
Recommendations for using artificial intelligence in clinical flow cytometry
Cytometry Part B Clinical Cytometry·2024· 25 citedOpen Access
Breastfeeding and Neonatal Age Influence Neutrophil‐Driven Ontogeny of Blood Cell Populations in the First Week of Human Life
Journal of Immunology Research·2024· 4 citedOpen Access
Data-Driven Science: How AI and Open Data will Revolutionize Scientific Discovery
Microscopy Today·2023Open Access
<scp>flowSim</scp> : Near duplicate detection for flow cytometry data
Cytometry Part A·2023· 1 citedOpen Access
Single-cell profiling reveals a memory B cell-like subtype of follicular lymphoma with increased transformation risk
Nature Communications·2022· 28 citedOpen Access
<scp>flowCut:</scp> An R package for automated removal of outlier events and flagging of files based on time versus fluorescence analysis
Cytometry Part A·2022· 41 citedOpen Access
Single-Cell Profiling Reveals Clinically Relevant Evolutionary Trajectories and Alternate Biologies in Human Follicular Lymphoma
Blood·2021
Automated identification of maximal differential cell populations in flow cytometry data
Cytometry Part A·2021· 4 citedOpen Access
Issue Information
Cytometry Part B Clinical Cytometry·2021Open Access
Multi-Omic Data Integration Allows Baseline Immune Signatures to Predict Hepatitis B Vaccine Response in a Small Cohort
Frontiers in Immunology·2020· 35 citedOpen Access
page 1 of 11Next →

Frequent Co-authors

Michael R. Hayden(12), Nima Aghaeepour(8), Raphaël Gottardo(7), Josef Špidlen(6), Richard H. Scheuermann(6), E. Almqvist(6), Pratip K. Chattopadhyay(5), Jane S. Paulsen(5), Greg Finak(5), Mehrnoush Malek(5), Mélanie Courtot(4), Alan Ruttenberg(4), Marina Frontali(4), Christopher A. Ross(4), Ali Bashashati(4), Florian Hahne(3), Holger H. Hoos(3), Tim R. Mosmann(3), Susanna‐Assunta Sansone(3), Jennifer Fostel(3)