Saheer E. Gharbia

Wellcome Sanger Institute — United Kingdom

Biochemistry, Genetics and Molecular Biology · Life Sciences

34h-index5.0kcitations173works8.12yr avg
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Research Topics

Bacterial Identification and Susceptibility Testing(37), Oral microbiology and periodontitis research(31), Genomics and Phylogenetic Studies(30), Bacteriophages and microbial interactions(22), Mycobacterium research and diagnosis(18)

Publications172 total

The Third Study of Infectious Intestinal Disease (IID3 Study) in the Community: Protocol for UK-Based Prospective Cohort Studies Investigating the Disease Burden
JMIR Research Protocols·2026Open Access
The Third Study of Infectious Intestinal Disease (IID3 Study) in the Community: Protocol for UK-Based Prospective Cohort Studies Investigating the Disease Burden (Preprint)
2025Open Access
Presence of phage-plasmids in multiple serovars of Salmonella enterica
Microbial Genomics·2024· 6 citedOpen Access
Re-analysis of an outbreak of Shiga toxin-producing Escherichia coli O157:H7 associated with raw drinking milk using Nanopore sequencing
Scientific Reports·2024· 3 citedOpen Access
Presence of phage-plasmids in multiple serovars of <i>Salmonella enterica</i>
2024Open Access
Quantitative measurement of antibiotic resistance in Mycobacterium tuberculosis reveals genetic determinants of resistance and susceptibility in a target gene approach
Nature Communications·2024· 42 citedOpen Access
Genomic epidemiology of the clinically dominant clonal complex 1 in the Listeria monocytogenes population in the UK
Microbial Genomics·2024· 6 citedOpen Access
A validated cloud-based genomic platform for co-ordinated, expedient global analysis of SARS-CoV-2 genomic epidemiology
2023Open Access
Prevalence and Persistence of Antibiotic Resistance Determinants in the Gut of Travelers Returning to the United Kingdom is Associated with Colonization by Pathogenic Escherichiacoli
Microbiology Spectrum·2023· 11 citedOpen Access
Progress in the Microbiological Applications of Mass Spectrometry: from Electron Impact to Soft Ionization Techniques, MALDI‐TOF MS and Beyond
2023
Index
2023Open Access
Front Matter
2023
Bedaquiline and clofazimine resistance in Mycobacterium tuberculosis: an in-vitro and in-silico data analysis
The Lancet Microbe·2023· 69 citedOpen Access
Evaluation of Genomic Typing Methods in the Salmonella Reference Laboratory in Public Health, England, 2012–2020
Pathogens·2023· 22 citedOpen Access
Understanding the impact of the COVID-19 pandemic response on GI infection surveillance trends in England, January 2020–April 2022
Epidemiology and Infection·2023· 13 citedOpen Access
Identification of domestic reservoirs and common exposures in an emerging lineage of Shiga toxin-producing Escherichia coli O157:H7 in England: a genomic epidemiological analysis
The Lancet Microbe·2022· 20 citedOpen Access
Use of long read sequencing to characterise the genomic architecture of mobile genetic elements encoding blaCTX-M-15 in Escherichia coli causing travellers’ diarrhoea
Access Microbiology·2022Open Access
Use of Nanopore Sequencing to Characterise the Genomic Architecture of Mobile Genetic Elements Encoding blaCTX-M-15 in Escherichia coli Causing Travellers’ Diarrhoea
Frontiers in Microbiology·2022· 10 citedOpen Access
Impact of the COVID-19 pandemic on gastrointestinal infection trends in England, February–July 2020
BMJ Open·2022· 61 citedOpen Access
Hospitalization and Mortality Risk for COVID-19 Cases With SARS-CoV-2 AY.4.2 (VUI-21OCT-01) Compared to Non-AY.4.2 Delta Variant Sublineages
The Journal of Infectious Diseases·2022· 12 citedOpen Access
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Frequent Co-authors

Haroun N. Shah(29), Raju Misra(7), Catherine Arnold(6), Timothy J. Dallman(5), Stefan Niemann(4), Claire Jenkins(4), Vesela Encheva(4), Zamin Iqbal(3), Martin Hunt(3), Kerri M. Malone(3), Daniela María Cirillo(3), Camilla Rodrigues(3), Kayzad Nilgiriwala(3), Matthias Merker(3), Dunstan Rajendram(3), David Wooldridge(3), Robin Wait(3), Nicholas J. Loman(2), Chrystala Constantinidou(2), John Wain(2)