Ekaterina E. Khrameeva

Skolkovo Institute of Science and Technology — Russia

Biochemistry, Genetics and Molecular Biology · Life Sciences

22h-index2.3kcitations93works6.22yr avg
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Research Topics

Genomics and Chromatin Dynamics(35), RNA Research and Splicing(23), Chromosomal and Genetic Variations(14), Epigenetics and DNA Methylation(10), Genomics and Phylogenetic Studies(8)

Publications93 total

Chromosome-level genome assembly of the sponge Halisarca dujardinii
2026Open Access
Do we actually need aging clocks?
npj Aging·2025Open Access
Discovering Candidate Anti-Aging Perturbations Using a Foundation Model for Gene Expression
International Journal of Molecular Sciences·2025Open Access
Histone deacetylase SIRT6 regulates tryptophan catabolism and prevents metabolite imbalance associated with neurodegeneration
Nature Communications·2025· 1 citedOpen Access
Somatic mutations impose an entropic upper bound on human lifespan
2025Open Access
The Divergent 3D Genome Landscapes of Aging and Neurodegenerative mouse models
2025Open Access
Ultra-long-range Polycomb-coupled interactions underlie subtype identity of human cortical neurons
2025Open Access
ComputAgeBench: Epigenetic Aging Clocks Benchmark
2025· 2 citedOpen Access
Fetal signatures in the 3D genome of iPSC-derived neurons: implications for disease modeling
2025· 1 citedOpen Access
The divergent intron-containing actin in sponge morphogenetic processes
NAR Genomics and Bioinformatics·2025· 1 citedOpen Access
Liquid condensates: a new barrier to loop extrusion?
Cellular and Molecular Life Sciences·2025· 4 citedOpen Access
Convergent pairs of highly transcribed genes restrict chromatin looping in <i>Dictyostelium discoideum</i>
Nucleic Acids Research·2025· 3 citedOpen Access
W87. TRANSCRIPTOME OF CORTEX TISSUES FROM A SCHIZOPHRENIA PATIENT WITH EXTREMELY LOW SCHIZOPHRENIA POLYGENIC SCORE
European Neuropsychopharmacology·2024
A hierarchical algorithm with randomized learning for robust tissue segmentation and classification in digital pathology
Information Sciences·2024· 3 cited
SIRT6 regulates Tryptophan catabolism preventing metabolite imbalance and neurodegeneration
2024· 1 citedOpen Access
Epistemic uncertainty challenges aging clock reliability in predicting rejuvenation effects
Aging Cell·2024· 15 citedOpen Access
Nuclear expansion and chromatin structure remodeling in mouse aging neurons
NAR Molecular Medicine·2024· 6 citedOpen Access
Nucleoporin Elys attaches peripheral chromatin to the nuclear pores in interphase nuclei
Communications Biology·2024· 7 citedOpen Access
Convergent gene pairs restrict chromatin looping in Dictyostelium discoideum, acting as directional barriers for extrusion
2024· 3 citedOpen Access
ComputAgeBench: Epigenetic Aging Clocks Benchmark
2024· 5 citedOpen Access
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Frequent Co-authors

Mikhail S. Gelfand(20), Sergey V. Ulianov(12), Sergey V. Razin(12), Aleksandra A. Galitsyna(9), Philipp Khaitovich(9), Alexey A. Gavrilov(8), Yuri Y. Shevelyov(6), Ilya M. Flyamer(5), Patrick Giavalisco(5), Dmitrii Kriukov(5), Pavel Kos(4), Alexander V. Chertovich(4), Artem V. Luzhin(4), Ilia Kurochkin(4), Anna Tkachev(4), Vita V. Stepanova(4), Anastasia Golova(4), Debra Toiber(4), Anna D. Kononkova(4), Ilya A Pletenev(4)