Aleksandra A. Galitsyna

Skolkovo Institute of Science and Technology — Russia

Biochemistry, Genetics and Molecular Biology · Life Sciences

17h-index1.5kcitations49works50.72yr avg
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Research Topics

Genomics and Chromatin Dynamics(30), RNA Research and Splicing(15), Genomics and Phylogenetic Studies(12), Chromosomal and Genetic Variations(9), Plant Molecular Biology Research(5)

Publications49 total

Extrusion fountains are hallmarks of chromosome organization emerging upon zygotic genome activation
2025Open Access
Convergent pairs of highly transcribed genes restrict chromatin looping in <i>Dictyostelium discoideum</i>
Nucleic Acids Research·2025· 3 citedOpen Access
Deciphering the 3D genome organization across species from Hi-C data
2024Open Access
Cohesin-mediated chromatin remodeling controls the differentiation and function of conventional dendritic cells
2024· 5 citedOpen Access
Single-Cell Hi-C Analysis Workflow with Pairtools
Methods in molecular biology·2024
Convergent gene pairs restrict chromatin looping in Dictyostelium discoideum, acting as directional barriers for extrusion
2024· 3 citedOpen Access
Pairtools: From sequencing data to chromosome contacts
PLoS Computational Biology·2024· 186 citedOpen Access
Cooltools: Enabling high-resolution Hi-C analysis in Python
PLoS Computational Biology·2024· 218 citedOpen Access
Bioframe: operations on genomic intervals in <i>Pandas</i> dataframes
Bioinformatics·2024· 41 citedOpen Access
Extrusion fountains are hallmarks of chromosome organization emerging upon zygotic genome activation
2023· 43 citedOpen Access
RNA-DNA interactomes of three prokaryotes uncovered by proximity ligation
Communications Biology·2023· 2 citedOpen Access
Pairtools: from sequencing data to chromosome contacts
2023· 91 citedOpen Access
HiConfidence: a novel approach uncovering the biological signal in Hi-C data affected by technical biases
Briefings in Bioinformatics·2023· 2 citedOpen Access
Cooltools: enabling high-resolution Hi-C analysis in Python
2022· 114 citedOpen Access
Promoter and enhancer RNAs regulate chromatin reorganization and activation of miR-10b/HOXD locus, and neoplastic transformation in glioma
Molecular Cell·2022· 32 citedOpen Access
Bioframe: Operations on Genomic Intervals in Pandas Dataframes
2022· 21 citedOpen Access
Spatial organization of transcribed eukaryotic genes
Nature Cell Biology·2022· 114 citedOpen Access
Comparison of genome architecture at two stages of male germline cell differentiation in<i>Drosophila</i>
Nucleic Acids Research·2022· 14 citedOpen Access
Bioframe: Operating on Genomic Interval Dataframes
2022· 9 citedOpen Access
RedChIP identifies noncoding RNAs associated with genomic sites occupied by Polycomb and CTCF proteins
Proceedings of the National Academy of Sciences·2021· 30 citedOpen Access
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Frequent Co-authors

Sergey V. Razin(27), Mikhail S. Gelfand(26), Sergey V. Ulianov(25), Ekaterina E. Khrameeva(21), Alexey A. Gavrilov(17), Ilya M. Flyamer(15), Nezar Abdennur(13), Maxim Imakaev(12), Geoffrey Fudenberg(7), Anton Goloborodko(7), Sergey V. Venev(7), Arkadiy K. Golov(7), Pavel Kos(6), Artem V. Luzhin(6), Elena A. Mikhaleva(6), Alexander V. Chertovich(6), Yuri Y. Shevelyov(5), Leonid A. Mirny(5), Maria D. Logacheva(5), Kirill Polovnikov(4)