Yunan Luo

Tongji University — China

Computer Science · Physical Sciences

20h-index2.9kcitations71works4.42yr avg
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Research Topics

Computational Drug Discovery Methods(19), Machine Learning in Bioinformatics(16), Protein Structure and Dynamics(14), Genomics and Phylogenetic Studies(12), Bioinformatics and Genomic Networks(8)

Publications71 total

Generalizable and scalable protein stability prediction with rewired protein generative models
Nature Communications·2025Open Access
Air transportation carbon dioxide emission forecasting: An improved back propagation neural network
PLoS ONE·2025· 1 citedOpen Access
Artificial Intelligence in Proteins and Peptides: A Comprehensive Overview from Hybrid Modeling to Deep Learning
Current Protein and Peptide Science·2025
Quantifying Fine-Grained Alignment Knowledge in Vision-Language Pre-trained Models via Interactions
2025
Deep Learning for the Prediction of Protein Sequence, Structure, Function, and Interaction: Applications, Challenges, and Future Directions
Current Proteomics·2025· 2 cited
Pareto-optimal sampling for multi-objective protein sequence design
iScience·2025· 6 citedOpen Access
Generalizable and scalable protein stability prediction with rewired protein generative models
2025Open Access
Learning maximally spanning representations improves protein function annotation
2025Open Access
Group Ligands Docking to Protein Pockets
arXiv (Cornell University)·2025Open Access
Learning Maximally Spanning Representations Improves Protein Function Annotation
Lecture notes in computer science·2025· 1 cited
HICCNN: A Hierarchical Approach to Enhancing Interpretability in Convolutional Neural Networks
2025Open Access
Rewiring Protein Sequence and Structure Generative Models to Enhance Protein Stability Prediction
Lecture notes in computer science·2025
Research on the development path of Chengdu as a low-carbon city under the dual constraints of carbon emission and economic growth
Frontiers in Environmental Science·2024· 1 citedOpen Access
BioDolphin as a comprehensive database of lipid–protein binding interactions
Communications Chemistry·2024· 4 citedOpen Access
Opportunities and challenges of graph neural networks in electrical engineering
Nature Reviews Electrical Engineering·2024· 12 cited
Are gene-by-environment interactions leveraged in multi-modality neural networks for breast cancer prediction?
arXiv (Cornell University)·2024Open Access
Machine learning-guided co-optimization of fitness and diversity facilitates combinatorial library design in enzyme engineering
Nature Communications·2024· 49 citedOpen Access
Leveraging conformal prediction to annotate enzyme function space with limited false positives
PLoS Computational Biology·2024· 3 citedOpen Access
Contrastive Fitness Learning: Reprogramming Protein Language Models for Low- <i>N</i> Learning of Protein Fitness Landscape
2024· 5 citedOpen Access
Contrastive Fitness Learning: Reprogramming Protein Language Models for Low-N Learning of Protein Fitness Landscape
Lecture notes in computer science·2024· 7 cited
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Frequent Co-authors

Jian Peng(23), Jianyang Zeng(8), Jianzhu Ma(8), Wesley Wei Qian(7), Yufeng Su(6), Kerr Ding(6), Ligong Chen(4), Huimin Zhao(4), Trey Ideker(4), Kaiyu Guan(4), Xinbin Zhao(3), Jingtian Zhou(3), Yanqing Zhang(3), Wenhua Kuang(3), Lam Vo(3), Hantian Ding(3), Sibo Wang(3), Bonnie Berger(3), Xiaoming Zhao(3), Jian Peng(3)