Anthony Huffman

University of Michigan — United States

Biochemistry, Genetics and Molecular Biology · Life Sciences

10h-index942citations40works1.52yr avg
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Research Topics

vaccines and immunoinformatics approaches(20), Biomedical Text Mining and Ontologies(14), Bioinformatics and Genomic Networks(9), Computational Drug Discovery Methods(7), Machine Learning in Bioinformatics(7)

Publications39 total

SEA CDM: Study-Experiment-Assay Common Data Model and Databases for Cross-Domain Data Integration and Analysis
Scientific Data·2026Open Access
SEA-CDM Supplemental Figures
Zenodo (CERN European Organization for Nuclear Research)·2025Open Access
SEA-CDM Supplemental Figures
Zenodo (CERN European Organization for Nuclear Research)·2025Open Access
SEA CDM: Study-Experiment-Assay Common Data Model and Databases for Cross-Domain Data Integration and Analysis
2025Open Access
VO: The Vaccine Ontology
2025Open Access
Immune Biomarkers, Profiles, and Responses: A Vaccine Ontology Perspective
2025· 1 citedOpen Access
A fourfold pathogen reference ontology suite
Journal of Biomedical Semantics·2025Open Access
Systematic collection, annotation, and pattern analysis of viral vaccines in the VIOLIN vaccine knowledgebase
Frontiers in Cellular and Infection Microbiology·2025· 3 citedOpen Access
Dietary cinnamon promotes longevity and extends healthspan via mTORC1 and autophagy signaling
Aging Cell·2025· 4 citedOpen Access
Empowering standardization of cancer vaccines through ontology: enhanced modeling and data analysis
Journal of Biomedical Semantics·2024· 4 citedOpen Access
Grounding Realizable Entities
arXiv (Cornell University)·2024Open Access
Ontological representation, modeling, and analysis of parasite vaccines
Journal of Biomedical Semantics·2024· 2 citedOpen Access
CanVaxKB: a web-based cancer vaccine knowledgebase
NAR Cancer·2024· 5 citedOpen Access
Bacterial whole-genome determination and applications
Elsevier eBooks·2024· 2 cited
CanVaxKB: A Web-based Cancer Vaccine Knowledgebase
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
CanVaxKB: A Web-based Cancer Vaccine Knowledgebase
Zenodo (CERN European Organization for Nuclear Research)·2023Open Access
Grounding Realizable Entities in Applied Ontologies
2023Open Access
Vaxign-DL: A Deep Learning-based Method for Vaccine Design and its Evaluation
2023· 11 citedOpen Access
VIGET: A web portal for study of vaccine-induced host responses based on Reactome pathways and ImmPort data
Frontiers in Immunology·2023· 4 citedOpen Access
Ontology-based representation and analysis of conditional vaccine immune responses using Omics data.
PubMed·2023· 1 citedOpen Access
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Frequent Co-authors

Yongqun He(31), Edison Ong(14), Anna Maria Masci(13), Jie Zheng(10), Junguk Hur(9), Yongqun He(9), John Beverley(8), Yu Lin(8), Gilbert S. Omenn(7), Barry Smith(7), Guanming Wu(7), Nasim Sanati(6), Yingtong Liu(5), Hsin-Hui Huang(5), Luonan Chen(5), Michael Cooke(5), Xiaolin Yang(4), Zuoshuang Xiang(4), Mei U Wong(3), Hong Yu(3)